RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-208	ENST00000594387	NSUN5P1	Q3KNT7	163 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	TGIF2LX	Q8IUE1	241 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	OR5AU1	Q8NGC0	362 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	OR2T10	Q8NGZ9	312 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	MRPL30	Q8TCC3	161 aa	Known RBP	13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	FCGR1B	Q92637	280 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	SULT4A1	Q9BR01	284 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	MBNL3	Q9NUK0	354 aa	Known RBP	13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	STEAP1	Q9UHE8	339 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	JPT1	Q9UK76	154 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	MGAT4A	Q9UM21	535 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	TSPAN15	O95858	294 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	REG1B	P48304	166 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	MRPS15	P82914	257 aa	Known RBP	13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	HTD2	P86397	168 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	DIAPH2-AS1	Q14236	149 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	MORN2	Q502X0	79 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387		Q6ZS46	218 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	SLC25A48	Q6ZT89	311 aa	Known RBP	13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	MOB1B	Q7L9L4	216 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	NDUFA11	Q86Y39	141 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	LYG1	Q8N1E2	194 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	OR51D1	Q8NGF3	324 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	OR56B1	Q8NGI3	324 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	FAM3D	Q96BQ1	224 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	NICN1	Q9BSH3	213 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	WNT10A	Q9GZT5	417 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	KCNK15	Q9H427	330 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	NDUFB11	Q9NX14	153 aa		13.85	□□□□□ -0.19
IRF3-208	ENST00000594387	TRAV1-2	A0A0B4J238	106 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	TRDV1	A0A1B0GX56	115 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	NCBP2L	A6PVI3	153 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	OPN1MW	P04001	364 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	OPN1MW2	P0DN77	364 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	OPN1MW3	P0DN78	364 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	CD28	P10747	220 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	GAL	P22466	123 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	PSMB9	P28065	219 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	VEGFC	P49767	419 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	QRFP	P83859	136 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	TMEM95	Q3KNT9	176 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	C2orf76	Q3KRA6	126 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	OR4F17	Q8NGA8	305 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	OR4X2	Q8NGF9	303 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	IL1F10	Q8WWZ1	152 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	OR4F4	Q96R69	305 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	RAB22A	Q9UL26	194 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	HSF4	Q9ULV5	492 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	NBEAL1	Q6ZS30	2694 aa		13.84	□□□□□ -0.19
IRF3-208	ENST00000594387	WNK1	Q9H4A3	2382 aa		13.83	□□□□□ -0.19
IRF3-208	ENST00000594387	FGF16	O43320	207 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	YPEL1	O60688	119 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	RAB3B	P20337	219 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	CD1B	P29016	333 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	CLDN12	P56749	244 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	SSX1	Q16384	188 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	CT45A1	Q5HYN5	189 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	HES5	Q5TA89	166 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	OR2AK2	Q8NG84	335 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	OR52L2P	Q8NGH6	319 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	CT45A3	Q8NHU0	189 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	YPEL2	Q96QA6	119 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	ABHD14A	Q9BUJ0	271 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	LPAR5	Q9H1C0	372 aa		13.83	□□□□□ -0.2
IRF3-208	ENST00000594387	IGHV3-72	A0A0B4J1Y9	119 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	SOCS1	O15524	211 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	MOS	P00540	346 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	GADD45A	P24522	165 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	ZNF134	P52741	427 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	UBE2U	Q5VVX9	321 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	FOXRED2	Q8IWF2	684 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	IZUMO1	Q8IYV9	350 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	SPART	Q8N0X7	666 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	FAM89B	Q8N5H3	189 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	ZNF439	Q8NDP4	499 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	ST6GALNAC6	Q969X2	333 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	R3HDM4	Q96D70	268 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	EAF1	Q96JC9	268 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	GFI1	Q99684	422 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	CITED2	Q99967	270 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	PLXNB1	O43157	2135 aa		13.82	□□□□□ -0.2
IRF3-208	ENST00000594387	TCRBV4S1A1T	A0A5B7	111 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	METTL21EP	A6NDL7	271 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	SH2D7	A6NKC9	451 aa	Predicted RBP	13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	SERPINE3	A8MV23	424 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	SLC31A2	O15432	143 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	HSPA12A	O43301	675 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	PPP1CC	P36873	323 aa	Known RBP	13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	SLC35B1	P78383	322 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	EBI3	Q14213	229 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	HMGN3	Q15651	99 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	LY6G6F	Q5SQ64	297 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	C22orf42	Q6IC83	251 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	SLC35E3	Q7Z769	313 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	C5orf56	Q8N8D9	126 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	OR8H1	Q8NGG4	311 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	CHPT1	Q8WUD6	406 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	RASL11B	Q9BPW5	248 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	CMSS1	Q9BQ75	279 aa	Known RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms