RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MUL1Q969V5 352 aa8.28□□□□□ -1.08
USE1-203ENST00000593597 CPNE2Q96FN4 548 aaPredicted RBP8.28□□□□□ -1.08
USE1-203ENST00000593597 RASL11BQ9BPW5 248 aa8.28□□□□□ -1.08
USE1-203ENST00000593597 ALX4Q9H161 411 aaPredicted RBP8.28□□□□□ -1.08
USE1-203ENST00000593597 RPL36Q9Y3U8 105 aaKnown RBP8.28□□□□□ -1.08
USE1-203ENST00000593597 IGHV7-81A0A0B4J1V7 117 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 LANCL1O43813 399 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 SOX15O60248 233 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 IGLV1-40P01703 118 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 CSTBP04080 98 aaKnown RBP8.27□□□□□ -1.09
USE1-203ENST00000593597 CD2P06729 351 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 FSTP19883 344 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 SOX6P35712 828 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 RIPK1Q13546 671 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 DCTN2Q13561 401 aaKnown RBP8.27□□□□□ -1.09
USE1-203ENST00000593597 C6orf141Q5SZD1 244 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 PRR18Q8N4B5 295 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 ZNF491Q8N8L2 437 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 OR8H1Q8NGG4 311 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 OR52L2PQ8NGH6 319 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 Q96MT0 163 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 RDH12Q96NR8 316 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 OR5B12Q96R08 314 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 OR14A2Q96R54 314 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 NABP2Q9BQ15 211 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 MRPL20Q9BYC9 149 aaKnown RBP8.27□□□□□ -1.09
USE1-203ENST00000593597 BANF2Q9H503 90 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 MBNL3Q9NUK0 354 aaKnown RBP8.27□□□□□ -1.09
USE1-203ENST00000593597 GAR1Q9NY12 217 aaKnown RBP8.27□□□□□ -1.09
USE1-203ENST00000593597 ETAA1Q9NY74 926 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 ZNF256Q9Y2P7 627 aaPredicted RBP8.27□□□□□ -1.09
USE1-203ENST00000593597 MRPS28Q9Y2Q9 187 aaKnown RBP8.27□□□□□ -1.09
USE1-203ENST00000593597 WSB1Q9Y6I7 421 aa8.27□□□□□ -1.09
USE1-203ENST00000593597 A0A1W2PPK0 400 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 FAM90A10PA6NDY2 464 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 TXNL1O43396 289 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 GTF2F2P13984 249 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 VDAC1P21796 283 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 IL3RAP26951 378 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 PPP1CCP36873 323 aaKnown RBP8.26□□□□□ -1.09
USE1-203ENST00000593597 OR3A3P47888 321 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 GP2P55259 537 aaKnown RBP8.26□□□□□ -1.09
USE1-203ENST00000593597 PPP3R1P63098 170 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 RUNX1Q01196 453 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 MMDQ15546 238 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 MORN2Q502X0 79 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 RAB12Q6IQ22 244 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 LAIR2Q6ISS4 152 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 ZFP1Q6P2D0 407 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 GLIPR1L1Q6UWM5 242 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 SBSPONQ8IVN8 264 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 MRPL30Q8TCC3 161 aaKnown RBP8.26□□□□□ -1.09
USE1-203ENST00000593597 NEK7Q8TDX7 302 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 GHSRQ92847 366 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 Q96M66 194 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 C9orf16Q9BUW7 83 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 S100A14Q9HCY8 104 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 TPSG1Q9NRR2 321 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 BABAM2Q9NXR7 383 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 GNG12Q9UBI6 72 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 TRAPPC2LQ9UL33 140 aa8.26□□□□□ -1.09
USE1-203ENST00000593597 UBE2QL1A1L167 161 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 RRP9O43818 475 aaKnown RBP8.25□□□□□ -1.09
USE1-203ENST00000593597 ZNF780AO75290 641 aaPredicted RBP8.25□□□□□ -1.09
USE1-203ENST00000593597 NDUFA3O95167 84 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 HLA-DRB1P01911 266 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 MGMTP16455 207 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 CHATP28329 748 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 BLVRBP30043 206 aaPredicted RBP8.25□□□□□ -1.09
USE1-203ENST00000593597 SLURP1P55000 103 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 ACTBP60709 375 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 Q499Y3 187 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 ZNF833PQ6ZTB9 187 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 PQLC1Q8N2U9 271 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 MINDY2Q8NBR6 621 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 OR1N2Q8NGR9 330 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 CASTOR1Q8WTX7 329 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 DCUN1D4Q92564 292 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 DERL3Q96Q80 235 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 MYCBPQ99417 103 aaPredicted RBP8.25□□□□□ -1.09
USE1-203ENST00000593597 ZNF251Q9BRH9 671 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 GON7Q9BXV9 100 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 ANKRD60Q9BZ19 345 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 PARP12Q9H0J9 701 aaKnown RBP8.25□□□□□ -1.09
USE1-203ENST00000593597 IFI27L2Q9H2X8 130 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 OR51J1Q9H342 316 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 TAF9BQ9HBM6 251 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 ISYNA1Q9NPH2 558 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 DIMT1Q9UNQ2 313 aaKnown RBP8.25□□□□□ -1.09
USE1-203ENST00000593597 PEX16Q9Y5Y5 336 aa8.25□□□□□ -1.09
USE1-203ENST00000593597 SAA2-SAA4A0A096LPE2 208 aa8.24□□□□□ -1.09
USE1-203ENST00000593597 PNMA8CA0A1B0GUJ8 204 aa8.24□□□□□ -1.09
USE1-203ENST00000593597 MCRIP1C9JLW8 97 aa8.24□□□□□ -1.09
USE1-203ENST00000593597 SPINT2O43291 252 aa8.24□□□□□ -1.09
USE1-203ENST00000593597 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
USE1-203ENST00000593597 EGR2P11161 476 aaPredicted RBP8.24□□□□□ -1.09
USE1-203ENST00000593597 DCKP27707 260 aa8.24□□□□□ -1.09
USE1-203ENST00000593597 CRIP2P52943 208 aaPredicted RBP8.24□□□□□ -1.09
USE1-203ENST00000593597 ZNF616Q08AN1 781 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms