RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 RSBN1Q5VWQ0 802 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-216ENST00000593223 TFAP2EQ6VUC0 442 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 ADAMTSL5Q6ZMM2 481 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 HIST2H3AQ71DI3 136 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 GLT6D1Q7Z4J2 308 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 GALNT10Q86SR1 603 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 SLC34A3Q8N130 599 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 OR2T33Q8NG76 320 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 OR2A1Q8NGT9 310 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 OR13G1Q8NGZ3 307 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 TRUB1Q8WWH5 349 aaKnown RBP3.61□□□□□ -1.83
SMAD4-216ENST00000593223 ASB17Q8WXJ9 295 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 ASB13Q8WXK3 278 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 CPNE2Q96FN4 548 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-216ENST00000593223 SLC19A3Q9BZV2 496 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 MS4A6AQ9H2W1 248 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 MIEF1Q9NQG6 463 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 TAS2R13Q9NYV9 303 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 GNPTGQ9UJJ9 305 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 DKKL1Q9UK85 242 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 NTNG1Q9Y2I2 539 aa3.61□□□□□ -1.83
SMAD4-216ENST00000593223 SVILO95425 2214 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 MYH13Q9UKX3 1938 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 TGIF2-C20orf24A0A0A6YYL0 155 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 IGHV2OR16-5A0A0B4J2B6 119 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 PRORSD1PA6NEY8 169 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 K7EMT4 169 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 K7EP13 123 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 SULT2B1O00204 365 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 TYROBPO43914 113 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 PFDN1O60925 122 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 OR7C1O76099 320 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 SEMG1P04279 462 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 OR13C7P0DN81 318 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 CD99P14209 185 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF250P15622 560 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 SERPINB5P36952 375 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 GCLMP48507 274 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 MEOX2P50222 304 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 CCR6P51684 374 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 SUB1P53999 127 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 CDKN2DP55273 166 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF121P58317 390 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 GNG3P63215 75 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 PMVKQ15126 192 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 NRF1Q16656 503 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 GSG1Q2KHT4 349 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 MS4A13Q5J8X5 152 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 OTPQ5XKR4 325 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 CYB5R2Q6BCY4 276 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 FAM231DQ6ZW35 169 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 CBLN2Q8IUK8 224 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 PRR22Q8IZ63 422 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF557Q8N988 423 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 OR1P1Q8NH06 330 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 OR13C6PQ8NH95 151 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 FNDC8Q8TC99 324 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 CD200R1Q8TD46 325 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 C1orf54Q8WWF1 131 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 RDH5Q92781 318 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 FGF14Q92915 247 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 YIPF5Q969M3 257 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 TMEM80Q96HE8 168 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 CMSS1Q9BQ75 279 aaKnown RBP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 MRPL45Q9BRJ2 306 aaKnown RBP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 RPF2Q9H7B2 306 aaKnown RBP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 TPT1P8Q9HAU6 139 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 DOK5Q9P104 306 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 RAB22AQ9UL26 194 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 C14orf166Q9Y224 244 aaKnown RBP3.6□□□□□ -1.83
SMAD4-216ENST00000593223 SLC35A3Q9Y2D2 325 aa3.6□□□□□ -1.83
SMAD4-216ENST00000593223 STAB1Q9NY15 2570 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 MED13LQ71F56 2210 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 BSNQ9UPA5 3926 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 KIF26AQ9ULI4 1882 aaPredicted RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 A0A087WUJ7 227 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 FAM240AA0A1B0GVK7 77 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 IGSF23A1L1A6 192 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 SLC17A3O00476 420 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 MFNGO00587 321 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 GABRPO00591 440 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 PDE6DO43924 150 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 SERPINA7P05543 415 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 TAC1P20366 129 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 PSMB9P28065 219 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 CCR7P32248 378 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 RCVRNP35243 200 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 UBE2E1P51965 193 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 SLC25A1P53007 311 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 IGLV3-21P80748 117 aaPredicted RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 MRPS11P82912 194 aaKnown RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 DEFA6Q01524 100 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 SLC25A11Q02978 314 aaKnown RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 PPP1R1AQ13522 171 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 KCNJ11Q14654 390 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 OR7A5Q15622 319 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 ZNF726P1Q15940 193 aa3.59□□□□□ -1.83
SMAD4-216ENST00000593223 SNRNP35Q16560 246 aaKnown RBP3.59□□□□□ -1.83
SMAD4-216ENST00000593223 TRMT12Q53H54 448 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms