RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 ST6GALNAC6Q969X2 333 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 LIN7CQ9NUP9 197 aaKnown RBP10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 GNG12Q9UBI6 72 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 BLOC1S6Q9UL45 172 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 TRBV5-7A0A0A0MS05 114 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 UBE2QL1A1L167 161 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 MCRIP1C9JLW8 97 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 AP4M1O00189 453 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 CRTAPO75718 401 aaPredicted RBP10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 MOSP00540 346 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 HBZP02008 142 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 MGMTP16455 207 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 RCC1P18754 421 aaPredicted RBP10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 GPR176Q14439 515 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 GNMTQ14749 295 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 SLC25A48Q6ZT89 311 aaKnown RBP10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 C8orf31Q8N9H6 132 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 FAM46BQ96A09 425 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 RAX2Q96IS3 184 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 DERL3Q96Q80 235 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 P2RX4Q99571 388 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 GPR61Q9BZJ8 451 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 SELENOIQ9C0D9 397 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 ABCG5Q9H222 651 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 SPACA1Q9HBV2 294 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 ZFP57Q9NU63 452 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 PEX16Q9Y5Y5 336 aa10.61□□□□□ -0.71
CAPNS1-213ENST00000592354 SPINT2O43291 252 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 GPX5O75715 221 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 MYCNOSP40205 109 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 ZNF134P52741 427 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 INSL4Q14641 139 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 CT45A1Q5HYN5 189 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 VAX1Q5SQQ9 334 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 C6orf183Q5T699 404 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 TEX38Q6PEX7 206 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 C5orf24Q7Z6I8 188 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 COMMD1Q8N668 190 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 CT45A3Q8NHU0 189 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 S1PR3Q99500 378 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 RASL11BQ9BPW5 248 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 TMED9Q9BVK6 235 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 PLSCR3Q9NRY6 295 aa10.6□□□□□ -0.71
CAPNS1-213ENST00000592354 CCL24O00175 119 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 TXNL1O43396 289 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 SLC2A2P11168 524 aaPredicted RBP10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 CD1BP29016 333 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 SLC6A1P30531 599 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 LUMP51884 338 aaPredicted RBP10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 ZNF137PP52743 207 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 F2RL1P55085 397 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 GABARAPL2P60520 117 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 CD69Q07108 199 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 GPR50Q13585 617 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 TBCEQ15813 527 aaPredicted RBP10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 PNLIPRP3Q17RR3 467 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 LIPKQ5VXJ0 399 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 MRPS24Q96EL2 167 aaKnown RBP10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 Q96M66 194 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 MCRIP2Q9BUT9 160 aaKnown RBP10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
CAPNS1-213ENST00000592354 SC5DO75845 299 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 PPP1CCP36873 323 aaKnown RBP10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 RPS25P62851 125 aaKnown RBP10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 LSAMPQ13449 338 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 Q3ZCU0 254 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 NKAPLQ5M9Q1 402 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 FAM27D1Q5T7N8 215 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 TRAT1Q6PIZ9 186 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 LYPD6Q86Y78 171 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 GAPTQ8N292 157 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 FAM71E2Q8N5Q1 922 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 NKAIN3Q8N8D7 197 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 UFD1Q92890 307 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 TMEM203Q969S6 136 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 GON7Q9BXV9 100 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 RAB9BQ9NP90 201 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 ACOT13Q9NPJ3 140 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 OR2S2Q9NQN1 319 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 COL7A1Q02388 2944 aa10.58□□□□□ -0.72
CAPNS1-213ENST00000592354 FAM90A10PA6NDY2 464 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 FAM90A7PA6NKC0 464 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 FAM90A23PA8MXZ1 464 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 CD1AP06126 327 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 VDAC1P21796 283 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 SOX6P35712 828 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 CFHR3Q02985 330 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 FOXE3Q13461 319 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 MMDQ15546 238 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 ZNF367Q7RTV3 350 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 SPARTQ8N0X7 666 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 OR8U1Q8NH10 309 aa10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 MRPL30Q8TCC3 161 aaKnown RBP10.57□□□□□ -0.72
CAPNS1-213ENST00000592354 MGLLQ99685 303 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms