RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 MOB1BQ7L9L4 216 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 C16orf82Q7Z2V1 217 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 OR8H3Q8N146 312 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 GAPTQ8N292 157 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 DRAM1Q8N682 238 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 OR52L2PQ8NGH6 319 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 IL1F10Q8WWZ1 152 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 RAB3CQ96E17 227 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 ARHGAP5-AS1Q96IT6 56 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 CMSS1Q9BQ75 279 aaKnown RBP8.1□□□□□ -1.11
BRCA1-227ENST00000591849 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 SLC25A33Q9BSK2 321 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 PECRQ9BY49 303 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 ATG5Q9H1Y0 275 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 LIN7BQ9HAP6 207 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 FBLN5Q9UBX5 448 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 AK3Q9UIJ7 227 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 DAPK2Q9UIK4 370 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 HSF4Q9ULV5 492 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 MGAT4AQ9UM21 535 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 SIGLEC9Q9Y336 463 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 A0A0A6YYD4 124 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 A0A0B4J203 849 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 LY6LH3BQJ8 138 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 TIMM23O14925 209 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 HSPA12AO43301 675 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 SNRNP70P08621 437 aaKnown RBP8.09□□□□□ -1.11
BRCA1-227ENST00000591849 VSIG10L2P0DP72 767 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 SLC2A2P11168 524 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-227ENST00000591849 RAB6AP20340 208 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 TALDO1P37837 337 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 LOXL3P58215 753 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 ARFRP1Q13795 201 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 HNF4GQ14541 408 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 Q3ZCU0 254 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 LYG1Q8N1E2 194 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 FAM89BQ8N5H3 189 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 LINC00311Q8N616 119 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 C8orf31Q8N9H6 132 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 OR10R2Q8NGX6 335 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 OR56B4Q8NH76 319 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 PHF21AQ96BD5 680 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 C12orf4Q9NQ89 552 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 MBNL3Q9NUK0 354 aaKnown RBP8.09□□□□□ -1.11
BRCA1-227ENST00000591849 JPT1Q9UK76 154 aa8.09□□□□□ -1.11
BRCA1-227ENST00000591849 SHISA3A0PJX4 238 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 M0QZK8 103 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 LDLRAD4O15165 306 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 OR2F2O95006 317 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 TMEM11P17152 192 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 SDC2P34741 201 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 PPP1CCP36873 323 aaKnown RBP8.08□□□□□ -1.12
BRCA1-227ENST00000591849 VDAC2P45880 294 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-227ENST00000591849 TMEM50BP56557 158 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 PROK1P58294 105 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 HTD2P86397 168 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 SRSF4Q08170 494 aaKnown RBP8.08□□□□□ -1.12
BRCA1-227ENST00000591849 DIAPH2-AS1Q14236 149 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 ARL6IP1Q15041 203 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 MORN2Q502X0 79 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 IDNKQ5T6J7 187 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 STEAP3Q658P3 488 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 FAM53AQ6NSI3 398 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-227ENST00000591849 THNSL2Q86YJ6 484 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 TGIF2LXQ8IUE1 241 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 OR2AK2Q8NG84 335 aa8.08□□□□□ -1.12
BRCA1-227ENST00000591849 RBM14Q96PK6 669 aaKnown RBP8.08□□□□□ -1.12
BRCA1-227ENST00000591849 HDHD3Q9BSH5 251 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-227ENST00000591849 IGHV3-72A0A0B4J1Y9 119 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 IGHV1-3A0A0C4DH29 117 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 M0QZ24 198 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 SLC31A2O15432 143 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 TXNL1O43396 289 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 AIREO43918 545 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 YPEL1O60688 119 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 NAPSAO96009 420 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 IGKV1D-33P01593 117 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 IGKV1-33P01594 117 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 CLEC2LP0C7M8 214 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 EFNB2P52799 333 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 BLCAPP62952 87 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 ZNF816Q0VGE8 651 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-227ENST00000591849 PLA2G7Q13093 441 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 GNMTQ14749 295 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 HERPUD1Q15011 391 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 HMGN3Q15651 99 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 ABCA11PQ4W5N1 156 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 SFXN4Q6P4A7 337 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 SLC25A48Q6ZT89 311 aaKnown RBP8.07□□□□□ -1.12
BRCA1-227ENST00000591849 C5orf24Q7Z6I8 188 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 KLHDC1Q8N7A1 406 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 C11orf44Q8N8P7 122 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 PTX4Q96A99 478 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 CYYR1Q96J86 154 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 YPEL2Q96QA6 119 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 ABHD14AQ9BUJ0 271 aa8.07□□□□□ -1.12
BRCA1-227ENST00000591849 RNF167Q9H6Y7 350 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms