RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 CHST1O43916 411 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 GAPDHP04406 335 aaKnown RBP13.19□□□□□ -0.3
DNMT1-221ENST00000589538 GADD45AP24522 165 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 ZNF816Q0VGE8 651 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-221ENST00000589538 HMGN3Q15651 99 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 LY6G6FQ5SQ64 297 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 UTF1Q5T230 341 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 CHCHD6Q9BRQ6 235 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 OR51E2Q9H255 320 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 ZNF696Q9H7X3 374 aa13.19□□□□□ -0.3
DNMT1-221ENST00000589538 IGHV3-43A0A0B4J1X8 118 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 FOXI3A8MTJ6 420 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-221ENST00000589538 TXNL1O43396 289 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 IGHV3-43DP0DP04 118 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 JUNBP17275 347 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-221ENST00000589538 MRPS15P82914 257 aaKnown RBP13.18□□□□□ -0.3
DNMT1-221ENST00000589538 ARL6IP1Q15041 203 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 ZNF880Q6PDB4 577 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 SLC25A48Q6ZT89 311 aaKnown RBP13.18□□□□□ -0.3
DNMT1-221ENST00000589538 Q8N2B8 174 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 RAB3CQ96E17 227 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 PECRQ9BY49 303 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 C12orf4Q9NQ89 552 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 AK3Q9UIJ7 227 aa13.18□□□□□ -0.3
DNMT1-221ENST00000589538 LOC100506127A0A0U1RQW1 187 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 A0A1W2PPI3 338 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 FAM90A9PA6NNJ1 464 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 M0QZK8 103 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 HSD17B6O14756 317 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 TIMM23O14925 209 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 TMEM127O75204 238 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 OR2F2O95006 317 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 TMEM50BP56557 158 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 SCAND1P57086 179 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 MORN2Q502X0 79 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 ZNF439Q8NDP4 499 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 SETD6Q8TBK2 473 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 ARHGAP5-AS1Q96IT6 56 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 RBM14Q96PK6 669 aaKnown RBP13.17□□□□□ -0.3
DNMT1-221ENST00000589538 CITED1Q99966 193 aa13.17□□□□□ -0.3
DNMT1-221ENST00000589538 CMSS1Q9BQ75 279 aaKnown RBP13.17□□□□□ -0.3
DNMT1-221ENST00000589538 A0A1W2PPE3 182 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 YPEL1O60688 119 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 SCGNO76038 276 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 SDC2P34741 201 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 ZNF137PP52743 207 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 EFNB2P52799 333 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 ARSJQ5FYB0 599 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-221ENST00000589538 SFXN4Q6P4A7 337 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 NR2C2APQ86WQ0 139 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 OR10V1Q8NGI7 309 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 OR10R2Q8NGX6 335 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 OR56B4Q8NH76 319 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 YPEL2Q96QA6 119 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 SLC25A33Q9BSK2 321 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 ZNF702PQ9H963 129 aa13.16□□□□□ -0.3
DNMT1-221ENST00000589538 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 TRIM64CA6NLI5 447 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 SERPINE3A8MV23 424 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 CD3GP09693 182 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 SLC2A2P11168 524 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-221ENST00000589538 HABP2Q14520 560 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-221ENST00000589538 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 DRAM1Q8N682 238 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-221ENST00000589538 IL1F10Q8WWZ1 152 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 CFHR4Q92496 578 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 ST6GALNAC6Q969X2 333 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 ABHD14AQ9BUJ0 271 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 DAPK2Q9UIK4 370 aa13.15□□□□□ -0.3
DNMT1-221ENST00000589538 SMIM30A4D0T7 59 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 AIREO43918 545 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 SNRNP70P08621 437 aaKnown RBP13.14□□□□□ -0.31
DNMT1-221ENST00000589538 HIST1H1DP16402 221 aaKnown RBP13.14□□□□□ -0.31
DNMT1-221ENST00000589538 CD24P25063 80 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 CD1BP29016 333 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 PPP1CCP36873 323 aaKnown RBP13.14□□□□□ -0.31
DNMT1-221ENST00000589538 HLA-DRB3P79483 266 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 HES1Q14469 280 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 MOB3BQ86TA1 216 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 CROCCP3Q8IVE0 287 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 OR2AK2Q8NG84 335 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 OR52L2PQ8NGH6 319 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 ATG5Q9H1Y0 275 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 Q9N2K0 584 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 MOB4Q9Y3A3 225 aa13.14□□□□□ -0.31
DNMT1-221ENST00000589538 A0A0B4J203 849 aa13.13□□□□□ -0.31
DNMT1-221ENST00000589538 RAB27BO00194 218 aa13.13□□□□□ -0.31
DNMT1-221ENST00000589538 ITGB1BP1O14713 200 aa13.13□□□□□ -0.31
DNMT1-221ENST00000589538 SLC31A2O15432 143 aa13.13□□□□□ -0.31
DNMT1-221ENST00000589538 LANCL1O43813 399 aa13.13□□□□□ -0.31
DNMT1-221ENST00000589538 PEX14O75381 377 aa13.13□□□□□ -0.31
DNMT1-221ENST00000589538 TMEM11P17152 192 aa13.13□□□□□ -0.31
DNMT1-221ENST00000589538 ZBTB25P24278 435 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms