RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MRGPRDQ8TDS7 321 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 SECTM1Q8WVN6 248 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 CCL17Q92583 94 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 C14orf79Q96F83 325 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 SUCNR1Q9BXA5 334 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 SLC5A7Q9GZV3 580 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 RAB1BQ9H0U4 201 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 NAA60Q9H7X0 242 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 DCAF16Q9NXF7 216 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
CCBE1-203ENST00000589116 IGKV1D-13A0A0B4J2D9 117 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 C19orf84I3L1E1 186 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 HBZP02008 142 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 GYPAP02724 150 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 IGKV1-13P0DP09 117 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 S100GP29377 79 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 GNRHRP30968 328 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 NKX2-5P52952 324 aaPredicted RBP10.04□□□□□ -0.8
CCBE1-203ENST00000589116 HTD2P86397 168 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 LY6G6FQ5SQ64 297 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 CMTM1Q8IZ96 169 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 DEFB108BQ8NET1 73 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 FAM216AQ8WUB2 273 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 CCL13Q99616 98 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 VRK1Q99986 396 aaPredicted RBP10.04□□□□□ -0.8
CCBE1-203ENST00000589116 CHIAQ9BZP6 476 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
CCBE1-203ENST00000589116 NDUFA2O43678 99 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 DANCRP0C864 163 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 DNASE1P24855 282 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 LUMP51884 338 aaPredicted RBP10.03□□□□□ -0.8
CCBE1-203ENST00000589116 EDDM3BP56851 147 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 ANKRD55Q3KP44 614 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 PHLDA2Q53GA4 152 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 KCTD9Q7L273 389 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 LDLRAD3Q86YD5 345 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 TPRX1Q8N7U7 411 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 OR10V1Q8NGI7 309 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 OR1L1Q8NH94 360 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 NINJ1Q92982 152 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 ARL11Q969Q4 196 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 RDH8Q9NYR8 311 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 KIAA2026Q5HYC2 2103 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 CSMD1Q96PZ7 3565 aa10.03□□□□□ -0.8
CCBE1-203ENST00000589116 SMLR1H3BR10 107 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 C15orf65H3BRN8 121 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 TNFRSF13BO14836 293 aaPredicted RBP10.02□□□□□ -0.8
CCBE1-203ENST00000589116 MPPED1O15442 326 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 SIX6O95475 246 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 WNT2P09544 360 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 SSTR5P35346 364 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 CEACAM6P40199 344 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 SRPXP78539 464 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 MRPS11P82912 194 aaKnown RBP10.02□□□□□ -0.8
CCBE1-203ENST00000589116 DCAF12L2Q5VW00 463 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 ZNF818PQ6ZRF7 136 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 LRTM2Q8N967 370 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 BVESQ8NE79 360 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 NEU4Q8WWR8 484 aaPredicted RBP10.02□□□□□ -0.8
CCBE1-203ENST00000589116 MARVELD3Q96A59 401 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 AKR1E2Q96JD6 320 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 JPT1Q9UK76 154 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 KLF2Q9Y5W3 355 aaPredicted RBP10.02□□□□□ -0.8
CCBE1-203ENST00000589116 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.8
CCBE1-203ENST00000589116 TRGV10A0A0A0MS01 117 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 A6NNC1 897 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 G3V3Q6 166 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 TMPRSS2O15393 492 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 B3GALNT1O75752 331 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 SNAPC5O75971 98 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 CD8AP01732 235 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 OR5AC1P0C628 307 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 SELLP14151 372 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 CYCSP99999 105 aaKnown RBP10.02□□□□□ -0.81
CCBE1-203ENST00000589116 TMEM187Q14656 261 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 MSMO1Q15800 293 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 GSG1LQ6UXU4 331 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 CCL28Q9NRJ3 127 aa10.02□□□□□ -0.81
CCBE1-203ENST00000589116 ABCA4P78363 2273 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 PIGBOS1A0A0B4J2F0 54 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 A0A1B0GW55 424 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 F2RL2O00254 374 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 SOD3P08294 240 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 DUX4L2P0CJ85 424 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 DUX4L3P0CJ86 424 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 DUX4L4P0CJ87 422 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 DUX4L5P0CJ88 424 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 DUX4L6P0CJ89 424 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 DUX4L7P0CJ90 424 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 CGB3P0DN86 165 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 CGB7P0DN87 165 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 FGL1Q08830 312 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 DUX4L9Q6RFH8 374 aaPredicted RBP10.01□□□□□ -0.81
CCBE1-203ENST00000589116 MEX3BQ6ZN04 569 aaKnown RBP10.01□□□□□ -0.81
CCBE1-203ENST00000589116 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
CCBE1-203ENST00000589116 TBC1D26Q86UD7 250 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms