RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ZNF45Q02386 682 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 AANATQ16613 207 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 PYDC2Q56P42 97 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 PAN3Q58A45 887 aaKnown RBP9.32□□□□□ -0.92
RFX1-204ENST00000588885 PLAC9Q5JTB6 97 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 UTF1Q5T230 341 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 ZNF626Q68DY1 528 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 SIGIRRQ6IA17 410 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 CCBE1Q6UXH8 406 aaPredicted RBP9.32□□□□□ -0.92
RFX1-204ENST00000588885 ABHD12Q8N2K0 398 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 CHST4Q8NCG5 386 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 OR56B1Q8NGI3 324 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 OR4C13Q8NGP0 309 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 OR10R2Q8NGX6 335 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 PHF21AQ96BD5 680 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 MRPS24Q96EL2 167 aaKnown RBP9.32□□□□□ -0.92
RFX1-204ENST00000588885 COQ2Q96H96 371 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 ARHGAP5-AS1Q96IT6 56 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 ABHD1Q96SE0 405 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 DIABLOQ9NR28 239 aa9.32□□□□□ -0.92
RFX1-204ENST00000588885 ELF5Q9UKW6 265 aaPredicted RBP9.32□□□□□ -0.92
RFX1-204ENST00000588885 MRPS7Q9Y2R9 242 aaKnown RBP9.32□□□□□ -0.92
RFX1-204ENST00000588885 UBE2J1Q9Y385 318 aaPredicted RBP9.32□□□□□ -0.92
RFX1-204ENST00000588885 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 TRAV24A0A0B4J272 114 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 FUOMA2VDF0 154 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 TMEM235A6NFC5 223 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 SCGNO76038 276 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 OR7C1O76099 320 aaPredicted RBP9.31□□□□□ -0.92
RFX1-204ENST00000588885 HLA-DQB1P01920 261 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 GNB3P16520 340 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
RFX1-204ENST00000588885 CD24P25063 80 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 NFYBP25208 207 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 CHATP28329 748 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 BLVRBP30043 206 aaPredicted RBP9.31□□□□□ -0.92
RFX1-204ENST00000588885 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
RFX1-204ENST00000588885 TMEM50BP56557 158 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 DGCR2P98153 550 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 HABP2Q14520 560 aaPredicted RBP9.31□□□□□ -0.92
RFX1-204ENST00000588885 ZNF260Q3ZCT1 412 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 RAB12Q6IQ22 244 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 Q6ZTK2 550 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 FAM89BQ8N5H3 189 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 RAB3CQ96E17 227 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 PECRQ9BY49 303 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 GAL3ST2Q9H3Q3 398 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 RHOFQ9HBH0 211 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 PCDHB16Q9NRJ7 776 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 RCC2Q9P258 522 aaKnown RBP9.31□□□□□ -0.92
RFX1-204ENST00000588885 TBL2Q9Y4P3 447 aaKnown RBP9.31□□□□□ -0.92
RFX1-204ENST00000588885 NOTCH1P46531 2555 aa9.31□□□□□ -0.92
RFX1-204ENST00000588885 MEIKINA0A087WXM9 373 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 A6NDX4 124 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 VGLL3A8MV65 326 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 F2RL2O00254 374 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 PDCD6O75340 191 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 IGHV3-7P01780 117 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 VSIG10L2P0DP72 767 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 PTBP1P26599 531 aaKnown RBP eCLIP9.3□□□□□ -0.92
RFX1-204ENST00000588885 GLP1RP43220 463 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 KIR2DS4P43632 304 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 PPP5CP53041 499 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 RBM39Q14498 530 aaKnown RBP9.3□□□□□ -0.92
RFX1-204ENST00000588885 LTC4SQ16873 150 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 MPV17LQ2QL34 196 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 PDLIM3Q53GG5 364 aaPredicted RBP9.3□□□□□ -0.92
RFX1-204ENST00000588885 C6orf201Q7Z4U5 140 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 LINC00596Q86U02 117 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 OR4P4Q8NGL7 312 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 FAM110DQ8TAY7 271 aaPredicted RBP9.3□□□□□ -0.92
RFX1-204ENST00000588885 NUDCD2Q8WVJ2 157 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 CORO2AQ92828 525 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 BORCS5Q969J3 196 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 TRIM63Q969Q1 353 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 SULT4A1Q9BR01 284 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 NPFFR1Q9GZQ6 430 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 ZNF286AQ9HBT8 521 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 RAB18Q9NP72 206 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 KIF25Q9UIL4 384 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 TCF19Q9Y242 345 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 KCNK7Q9Y2U2 307 aa9.3□□□□□ -0.92
RFX1-204ENST00000588885 MEIS3P1A6NDR6 274 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A10PA6NDY2 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A18PA6NE21 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A16PA6NEW6 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A20PA6NIJ5 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A7PA6NKC0 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A22PA8MWA6 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A12PA8MX19 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A5PA8MXJ8 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A23PA8MXZ1 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 TOR1AO14656 332 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 CTDSPLO15194 276 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 TSPAN15O95858 294 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 CD3GP09693 182 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A15PP0C7V4 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A13PP0C7W8 464 aa9.29□□□□□ -0.92
RFX1-204ENST00000588885 FAM90A14PP0C7W9 464 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms