RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 EBI3Q14213 229 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 C6orf183Q5T699 404 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 C6orf201Q7Z4U5 140 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 OR52L2PQ8NGH6 319 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 EAF1Q96JC9 268 aaPredicted RBP12.75□□□□□ -0.37
CXXC1-209ENST00000587342 NOL4LQ96MY1 436 aaPredicted RBP12.75□□□□□ -0.37
CXXC1-209ENST00000587342 TAF9BQ9HBM6 251 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 GNG12Q9UBI6 72 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 GHRLQ9UBU3 117 aa12.75□□□□□ -0.37
CXXC1-209ENST00000587342 LINC01548A6NM66 108 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 TMEM14DPA8MWL7 114 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 SPINT2O43291 252 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 CA11O75493 328 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 GAPDHP04406 335 aaKnown RBP12.74□□□□□ -0.37
CXXC1-209ENST00000587342 UBBP0CG47 229 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 FABP5Q01469 135 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 EMX1Q04741 257 aaPredicted RBP12.74□□□□□ -0.37
CXXC1-209ENST00000587342 P2RY14Q15391 338 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 Q3ZCU0 254 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 OXLD1Q5BKU9 147 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 CENPVQ7Z7K6 275 aaPredicted RBP12.74□□□□□ -0.37
CXXC1-209ENST00000587342 CNBD2Q96M20 576 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 TM2D1Q9BX74 207 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
CXXC1-209ENST00000587342 FGF16O43320 207 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 CPEP16870 476 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 PPP1CCP36873 323 aaKnown RBP12.73□□□□□ -0.37
CXXC1-209ENST00000587342 MLLT11Q13015 90 aaPredicted RBP12.73□□□□□ -0.37
CXXC1-209ENST00000587342 SSX1Q16384 188 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 ZNF329Q86UD4 541 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 ODF3L1Q8IXM7 274 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 OR4F17Q8NGA8 305 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 FAAP24Q9BTP7 215 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 CCDC90BQ9GZT6 254 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 ISYNA1Q9NPH2 558 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 PLSCR3Q9NRY6 295 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
CXXC1-209ENST00000587342 AK6Q9Y3D8 172 aaKnown RBP12.73□□□□□ -0.37
CXXC1-209ENST00000587342 TCRBV4S1A1TA0A5B7 111 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 FOXI3A8MTJ6 420 aaPredicted RBP12.72□□□□□ -0.37
CXXC1-209ENST00000587342 BPNT1O95861 308 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 PLA2G7Q13093 441 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 HMGN3Q15651 99 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 TMEM30BQ3MIR4 351 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 MORN2Q502X0 79 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 TRAT1Q6PIZ9 186 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 SVOPQ8N4V2 548 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 Q8N9W7 124 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 KCNG3Q8TAE7 436 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 MGLLQ99685 303 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 HDHD3Q9BSH5 251 aaPredicted RBP12.72□□□□□ -0.37
CXXC1-209ENST00000587342 LPAR5Q9H1C0 372 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 OR2S2Q9NQN1 319 aa12.72□□□□□ -0.37
CXXC1-209ENST00000587342 SHISA3A0PJX4 238 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 PSMB11A5LHX3 300 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 SLC17A2O00624 439 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 SOCS1O15524 211 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 NAPSAO96009 420 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 IGHG2P01859 326 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 IL3RAP26951 378 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 CLDN12P56749 244 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 TBCEQ15813 527 aaPredicted RBP12.71□□□□□ -0.37
CXXC1-209ENST00000587342 C18orf65Q6ZTR6 163 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 ZNF554Q86TJ5 538 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 TGIF2LXQ8IUE1 241 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 NEDD4LQ96PU5 975 aa12.71□□□□□ -0.37
CXXC1-209ENST00000587342 PARP12Q9H0J9 701 aaKnown RBP12.71□□□□□ -0.37
CXXC1-209ENST00000587342 TSSC4Q9Y5U2 329 aaPredicted RBP12.71□□□□□ -0.37
CXXC1-209ENST00000587342 CALRP27797 417 aaKnown RBP12.7□□□□□ -0.38
CXXC1-209ENST00000587342 CD1BP29016 333 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 GPR12P47775 334 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 ZNF880Q6PDB4 577 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 ETV3LQ6ZN32 361 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 OR2T10Q8NGZ9 312 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 HSPB9Q9BQS6 159 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 ABHD14AQ9BUJ0 271 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 MRPL20Q9BYC9 149 aaKnown RBP12.7□□□□□ -0.38
CXXC1-209ENST00000587342 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 VCX3BQ9H321 246 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 JPT1Q9UK76 154 aa12.7□□□□□ -0.38
CXXC1-209ENST00000587342 SERPINE3A8MV23 424 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 LANCL1O43813 399 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 ATP6V1G2O95670 118 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 MOSP00540 346 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 BLVRBP30043 206 aaPredicted RBP12.69□□□□□ -0.38
CXXC1-209ENST00000587342 OR3A3P47888 321 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 HSPA13P48723 471 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 F2RL1P55085 397 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 HTD2P86397 168 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 LSAMPQ13449 338 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 RAB11BQ15907 218 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 KHDC1LQ5JSQ8 128 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 SLC35E3Q7Z769 313 aa12.69□□□□□ -0.38
CXXC1-209ENST00000587342 FAM89BQ8N5H3 189 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms