RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
SDF2-204ENST00000587338 IGKV1-27A0A075B6S5 117 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 IGHV2-26A0A0B4J1V2 119 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 PQLC2LA1A4F0 135 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 OR5B21A6NL26 309 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 KDM4BO94953 1096 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 OR2F2O95006 317 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 NXPH2O95156 264 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 LY86O95711 162 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 APOA1P02647 267 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 RBP4P02753 201 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 UBBP0CG47 229 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 HTR1DP28221 377 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 BRS3P32247 399 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 SNU13P55769 128 aaKnown RBP6.77□□□□□ -1.33
SDF2-204ENST00000587338 ZNF45Q02386 682 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 PLA2G7Q13093 441 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 RNASE12Q5GAN4 147 aaKnown RBP6.77□□□□□ -1.33
SDF2-204ENST00000587338 ADAMTSL5Q6ZMM2 481 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 SLC25A26Q70HW3 274 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 CCDC190Q86UF4 302 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 ZNF573Q86YE8 665 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 OR8H2Q8N162 312 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 POC1AQ8NBT0 407 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 CHST4Q8NCG5 386 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 SLAMF9Q96A28 289 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 ZNF714Q96N38 554 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 RBM14Q96PK6 669 aaKnown RBP6.77□□□□□ -1.33
SDF2-204ENST00000587338 CST11Q9H112 138 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 DIABLOQ9NR28 239 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 RHBDL2Q9NX52 303 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 RAB22AQ9UL26 194 aa6.77□□□□□ -1.33
SDF2-204ENST00000587338 A0A1W2PP11 408 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 METTL21EPA6NDL7 271 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 AMY1AP04745 511 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 AMY2AP04746 511 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 SNRNP70P08621 437 aaKnown RBP6.76□□□□□ -1.33
SDF2-204ENST00000587338 SLC6A1P30531 599 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 VEGFCP49767 419 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 ARHGDIBP52566 201 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 SCAND1P57086 179 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 ZP1P60852 638 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 PITPNAQ00169 270 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 PDZK1IP1Q13113 114 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 GPR176Q14439 515 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 EDDM3AQ14507 147 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 TMEM69Q5SWH9 247 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 C9orf66Q5T8R8 295 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 GDPD3Q7L5L3 318 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 LYPD6Q86Y78 171 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 SBSPONQ8IVN8 264 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 ZNF695Q8IW36 515 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 MFSD4AQ8N468 514 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 OR51T1Q8NGJ9 327 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 KCNG3Q8TAE7 436 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 BORCS5Q969J3 196 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 SLC25A38Q96DW6 304 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 RAX2Q96IS3 184 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 CMTM3Q96MX0 182 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 NOL4LQ96MY1 436 aaPredicted RBP6.76□□□□□ -1.33
SDF2-204ENST00000587338 URM1Q9BTM9 101 aaKnown RBP6.76□□□□□ -1.33
SDF2-204ENST00000587338 CLEC7AQ9BXN2 247 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 SELENOIQ9C0D9 397 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 PCDHB16Q9NRJ7 776 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 GHRLQ9UBU3 117 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 ZNF256Q9Y2P7 627 aaPredicted RBP6.76□□□□□ -1.33
SDF2-204ENST00000587338 SMAD5-AS1Q9Y6J3 95 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 SESN1Q9Y6P5 492 aa6.76□□□□□ -1.33
SDF2-204ENST00000587338 TRAV18A0A075B6X5 111 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 LINC00854A0A1B0GVQ3 168 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 TMEM14DPA8MWL7 114 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 SEC14L6B5MCN3 397 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 J3QT63 122 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 K7N7A8 449 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 M0QZK8 103 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 CCL24O00175 119 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 ZNF780AO75290 641 aaPredicted RBP6.75□□□□□ -1.33
SDF2-204ENST00000587338 CD37P11049 281 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 MGMTP16455 207 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 RAB6AP20340 208 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 BCL3P20749 454 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 GABRR1P24046 479 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 CDK2P24941 298 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 INPP1P49441 399 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 PPP5CP53041 499 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 UNC119Q13432 240 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 DEFB136Q30KP8 78 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 PYHIN1Q6K0P9 492 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 BAIAP2L2Q6UXY1 529 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 TCF23Q7RTU1 214 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 OVCH2Q7RTZ1 564 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 SNX29P2Q8IUI4 249 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 TMEM104Q8NE00 496 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 OR4P4Q8NGL7 312 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 OR5M8Q8NGP6 311 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 CHPT1Q8WUD6 406 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 NRIP2Q9BQI9 281 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 TMEM59Q9BXS4 323 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 ABCG5Q9H222 651 aa6.75□□□□□ -1.33
SDF2-204ENST00000587338 TMEM133Q9H2Q1 129 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms