RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 SOX6P35712 828 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
VAT1-205ENST00000587173 ST3GAL4Q11206 333 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
VAT1-205ENST00000587173 SLC25A48Q6ZT89 311 aaKnown RBP12.32□□□□□ -0.44
VAT1-205ENST00000587173 ZFP41Q8N8Y5 198 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 TMEM104Q8NE00 496 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 OR8U1Q8NH10 309 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 OR14A2Q96R54 314 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 ANKRD60Q9BZ19 345 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 SELENOIQ9C0D9 397 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 PLSCR3Q9NRY6 295 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 KCNIP1Q9NZI2 227 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 NBEAL2Q6ZNJ1 2754 aa12.32□□□□□ -0.44
VAT1-205ENST00000587173 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 RYR3Q15413 4870 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 FAM90A10PA6NDY2 464 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 EFCAB10A6NFE3 127 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 FAM90A7PA6NKC0 464 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 FAM90A23PA8MXZ1 464 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 RAMP3O60896 148 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
VAT1-205ENST00000587173 HBZP02008 142 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 FUT3P21217 361 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 CDX1P47902 265 aaPredicted RBP12.31□□□□□ -0.44
VAT1-205ENST00000587173 ZNF137PP52743 207 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 RPS11P62280 158 aaKnown RBP eCLIP12.31□□□□□ -0.44
VAT1-205ENST00000587173 FOXE3Q13461 319 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 DOC2BQ14184 412 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 KIR2DS1Q14954 304 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 CT45A1Q5HYN5 189 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 OR10V1Q8NGI7 309 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 OR5M8Q8NGP6 311 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 CT45A3Q8NHU0 189 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 THRSPQ92748 146 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 GGHQ92820 318 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 BANF2Q9H503 90 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 OR2S2Q9NQN1 319 aa12.31□□□□□ -0.44
VAT1-205ENST00000587173 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 MAGEA13PA6NCF6 341 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 ZNF736B4DX44 427 aaPredicted RBP12.3□□□□□ -0.44
VAT1-205ENST00000587173 SLC31A2O15432 143 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 MGMTP16455 207 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 MYF6P23409 242 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 ZNF134P52741 427 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 C9orf66Q5T8R8 295 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 GAPTQ8N292 157 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 ZNF439Q8NDP4 499 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 OR1L1Q8NH94 360 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 PGLYRP3Q96LB9 341 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 PRR25Q96S07 402 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 HSPB9Q9BQS6 159 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 TAF9BQ9HBM6 251 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 GHRLQ9UBU3 117 aa12.3□□□□□ -0.44
VAT1-205ENST00000587173 PNMA8CA0A1B0GUJ8 204 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 UBE2QL1A1L167 161 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 MYL12BO14950 172 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 LANCL1O43813 399 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
VAT1-205ENST00000587173 RCC1P18754 421 aaPredicted RBP12.29□□□□□ -0.44
VAT1-205ENST00000587173 CELP19835 753 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 MAPK3P27361 379 aaPredicted RBP12.29□□□□□ -0.44
VAT1-205ENST00000587173 F2RL1P55085 397 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 MORN2Q502X0 79 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 ZNF554Q86TJ5 538 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 NKAIN3Q8N8D7 197 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 RNF152Q8N8N0 203 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 ZNF485Q8NCK3 441 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 FBLIM1Q8WUP2 373 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
VAT1-205ENST00000587173 CHCHD6Q9BRQ6 235 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 UQCC2Q9BRT2 126 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 CST11Q9H112 138 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 SCN3BQ9NY72 215 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 CNOT2Q9NZN8 540 aaKnown RBP12.29□□□□□ -0.44
VAT1-205ENST00000587173 LRRC42Q9Y546 428 aa12.29□□□□□ -0.44
VAT1-205ENST00000587173 SEC14L6B5MCN3 397 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 SC5DO75845 299 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 RGS11O94810 467 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 IGHG4P01861 327 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 CD1AP06126 327 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 ECI1P42126 302 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 CFHR3Q02985 330 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 TMEM65Q6PI78 240 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 C4orf3Q8WVX3 66 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 CNBD2Q96M20 576 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 DERL3Q96Q80 235 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 PLCXD1Q9NUJ7 323 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 ZNF107Q9UII5 783 aaPredicted RBP12.28□□□□□ -0.44
VAT1-205ENST00000587173 LSM4Q9Y4Z0 139 aaKnown RBP12.28□□□□□ -0.44
VAT1-205ENST00000587173 U3KQK5 164 aa12.28□□□□□ -0.44
VAT1-205ENST00000587173 PDCD6O75340 191 aa12.27□□□□□ -0.45
VAT1-205ENST00000587173 IGF1P05019 195 aa12.27□□□□□ -0.45
VAT1-205ENST00000587173 WNT4P56705 351 aa12.27□□□□□ -0.45
VAT1-205ENST00000587173 LSAMPQ13449 338 aa12.27□□□□□ -0.45
VAT1-205ENST00000587173 MMDQ15546 238 aa12.27□□□□□ -0.45
VAT1-205ENST00000587173 C6orf141Q5SZD1 244 aa12.27□□□□□ -0.45
VAT1-205ENST00000587173 BPIFB6Q8NFQ5 453 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms