RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 Q8N2B8 174 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 TOMM40LQ969M1 308 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 ST6GALNAC6Q969X2 333 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 RPEQ96AT9 228 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 CHCHD6Q9BRQ6 235 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 PECRQ9BY49 303 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 VCX3AQ9NNX9 186 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 VWFP04275 2813 aa13.04□□□□□ -0.32
ERBB2-222ENST00000584908 IGHV3-43A0A0B4J1X8 118 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 A0A1W2PPI3 338 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 HAX1O00165 279 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 RAB27BO00194 218 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 IGHV3-43DP0DP04 118 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 SDC2P34741 201 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 MNDAP41218 407 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 TIMM50Q3ZCQ8 353 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 FAM53AQ6NSI3 398 aaPredicted RBP13.03□□□□□ -0.32
ERBB2-222ENST00000584908 TMEM219Q86XT9 240 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 OR8H3Q8N146 312 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 OR4C13Q8NGP0 309 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 OR10X1Q8NGY0 326 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 CFHR4Q92496 578 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 YIPF6Q96EC8 236 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 ARHGAP5-AS1Q96IT6 56 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 CENPOQ9BU64 300 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 GNG12Q9UBI6 72 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 AK3Q9UIJ7 227 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 JPT1Q9UK76 154 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 MGAT4AQ9UM21 535 aa13.03□□□□□ -0.32
ERBB2-222ENST00000584908 A0A0B4J203 849 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 A0A1W2PPE3 182 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 SLC2A2P11168 524 aaPredicted RBP13.02□□□□□ -0.33
ERBB2-222ENST00000584908 ZNF134P52741 427 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 DIAPH2-AS1Q14236 149 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 MORN2Q502X0 79 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 CT45A1Q5HYN5 189 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 C11orf88Q6PI97 169 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 PRR18Q8N4B5 295 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 OR10R2Q8NGX6 335 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 CT45A3Q8NHU0 189 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 GALMQ96C23 342 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 CITED1Q99966 193 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 C12orf4Q9NQ89 552 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 OR2S2Q9NQN1 319 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 KCNK7Q9Y2U2 307 aa13.02□□□□□ -0.33
ERBB2-222ENST00000584908 LOC100506127A0A0U1RQW1 187 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 HSD17B6O14756 317 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 TIMM23O14925 209 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 SLC31A2O15432 143 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 YPEL1O60688 119 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 SCAND1P57086 179 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 MOGAT2Q3SYC2 334 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 C5orf24Q7Z6I8 188 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 SGMS2Q8NHU3 365 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 RAB3CQ96E17 227 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 RBM14Q96PK6 669 aaKnown RBP13.01□□□□□ -0.33
ERBB2-222ENST00000584908 YPEL2Q96QA6 119 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 ZNF702PQ9H963 129 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 MGAM2Q2M2H8 2515 aa13.01□□□□□ -0.33
ERBB2-222ENST00000584908 TRRAPQ9Y4A5 3859 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 SMIM30A4D0T7 59 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 METTL21EPA6NDL7 271 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 MFNGO00587 321 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 TMEM127O75204 238 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 OR2F2O95006 317 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 GAPDHP04406 335 aaKnown RBP13□□□□□ -0.33
ERBB2-222ENST00000584908 CD24P25063 80 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 IL3RAP26951 378 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 KRTAP10-3P60369 221 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 EBI3Q14213 229 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 FBLN7Q53RD9 439 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 OR52L2PQ8NGH6 319 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 AKR1E2Q96JD6 320 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 CMSS1Q9BQ75 279 aaKnown RBP13□□□□□ -0.33
ERBB2-222ENST00000584908 HDHD3Q9BSH5 251 aaPredicted RBP13□□□□□ -0.33
ERBB2-222ENST00000584908 CHMP1AQ9HD42 196 aaPredicted RBP13□□□□□ -0.33
ERBB2-222ENST00000584908 Q9N2K0 584 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
ERBB2-222ENST00000584908 ABRACLQ9P1F3 81 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 DAPK2Q9UIK4 370 aa13□□□□□ -0.33
ERBB2-222ENST00000584908 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 SERPINE3A8MV23 424 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 TXNL1O43396 289 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 RGS11O94810 467 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 CLEC2LP0C7M8 214 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 FAM106CPP0CH98 169 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 HIST1H1DP16402 221 aaKnown RBP12.99□□□□□ -0.33
ERBB2-222ENST00000584908 PPP1CCP36873 323 aaKnown RBP12.99□□□□□ -0.33
ERBB2-222ENST00000584908 HLA-DRB3P79483 266 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 GNMTQ14749 295 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 DRAM1Q8N682 238 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 OR56B4Q8NH76 319 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 RTN4IP1Q8WWV3 396 aaPredicted RBP12.99□□□□□ -0.33
ERBB2-222ENST00000584908 PRSS22Q9GZN4 317 aa12.99□□□□□ -0.33
ERBB2-222ENST00000584908 ITGB1BP1O14713 200 aa12.98□□□□□ -0.33
ERBB2-222ENST00000584908 AIREO43918 545 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms