RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	PRSS54	Q6PEW0	395 aa		9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	UBAC2	Q8NBM4	344 aa		9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	LYZL4	Q96KX0	146 aa		9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RBM24	Q9BX46	236 aa	Known RBP	9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	NMES1	Q9C002	83 aa		9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	LIME1	Q9H400	295 aa		9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PNRC2	Q9NPJ4	139 aa	Known RBP	9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	MMP26	Q9NRE1	261 aa		9.99	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	AKAP13	Q12802	2813 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	DSP	P15924	2871 aa	Known RBP	9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ZNF43	P17038	809 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SSR4	P51571	173 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RAN	P62826	216 aa	Known RBP	9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TNXA	Q16473	311 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	IMMP1L	Q96LU5	166 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SH3BGRL3	Q9H299	93 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	B3GALT5	Q9Y2C3	310 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	MMP24	Q9Y5R2	645 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SPEN	Q96T58	3664 aa	Known RBP	9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	hCG_38984	A0A1B0GV85	526 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CCL25	O15444	150 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TMEM225B	P0DP42	221 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	HKR1	P10072	659 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CD37	P11049	281 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ZNF708	P17019	499 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RPL12	P30050	165 aa	Known RBP	9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SLC25A53	Q5H9E4	307 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SUMF1	Q8NBK3	374 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	S100A13	Q99584	98 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	EIF5A2	Q9GZV4	153 aa	Known RBP	9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PLEKHJ1	Q9NW61	149 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PIGL	Q9Y2B2	252 aa		9.98	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ZNF726	A6NNF4	738 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063		K7EPK0	472 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TNFSF12	O43508	249 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	IGHG1	P01857	330 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	WDR25	Q64LD2	544 aa	Predicted RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CRIP3	Q6Q6R5	217 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	FAM71E2	Q8N5Q1	922 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	C2orf50	Q96LR7	162 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TMEM100	Q9NV29	134 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CRIM1	Q9NZV1	1036 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	FBXO7	Q9Y3I1	522 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063		A0A0G2JMM0	328 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063		A0A1W2PPB8	328 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063		A0A1W2PRS3	328 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	KIR3DP1	A8MWS1	328 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063		H0Y980	276 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	MFNG	O00587	321 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PPIH	O43447	177 aa	Known RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	GNG7	O60262	68 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TRAPPC6A	O75865	159 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OR13C7	P0DN81	318 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OMG	P23515	440 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RBMX	P38159	391 aa	Known RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SUMO1	P63165	101 aa	Known RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ATP1A1-AS1	Q5TC04	95 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PPP1R32	Q7Z5V6	425 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	POC1A	Q8NBT0	407 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PTX4	Q96A99	478 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PECR	Q9BY49	303 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	DOCK10	Q96BY6	2186 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ZNF850	A8MQ14	1090 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TRDC	B7Z8K6	153 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CAV2	P51636	162 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CYCS	P99999	105 aa	Known RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063		Q0VFX4	171 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OR5I1	Q13606	314 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	MIDN	Q504T8	468 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ADAM5	Q6NVV9	412 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RNASEK	Q6P5S7	137 aa	Known RBP	9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SLC25A47	Q6Q0C1	308 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OPN5	Q6U736	354 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	LYZL2	Q7Z4W2	148 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ADAMTS17	Q8TE56	1095 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	KIRREL1	Q96J84	757 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SIRPD	Q9H106	197 aa		9.97	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	FREM1	Q5H8C1	2179 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SPTBN4	Q9H254	2564 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PRH1	P02810	166 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	S100G	P29377	79 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OR3A1	P47881	315 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ELL	P55199	621 aa	Predicted RBP	9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TAS2R31	P59538	309 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	GGNBP1	Q5YKI7	109 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	SPINK14	Q6IE38	97 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ASB13	Q8WXK3	278 aa		9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PINX1	Q96BK5	328 aa	Known RBP	9.96	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ARHGAP21	Q5T5U3	1957 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	COLCA2	A8K830	154 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	MSTN	O14793	375 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	CEACAM4	O75871	244 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	IFNA17	P01571	189 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	IRF2	P14316	349 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	FPR2	P25090	351 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	NTF4	P34130	210 aa		9.96	□□□□□ -0.82
CDK5RAP3-231	ENST00000584063	RPL32	P62910	135 aa	Known RBP	9.96	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms