RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 OR8H2Q8N162 312 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 C11orf42Q8N5U0 333 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 PECRQ9BY49 303 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 PLEKHJ1Q9NW61 149 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 OR14J1Q9UGF5 321 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 GLS2Q9UI32 602 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 HSF4Q9ULV5 492 aa16.52■□□□□ 0.23
SRSF1-206ENST00000583741 TENM3Q9P273 2699 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 FUT3P21217 361 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 PRSS3P35030 304 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 ERVFRD-1P60508 538 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 DGCR2P98153 550 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 SCN1BQ07699 218 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 DCTN2Q13561 401 aaKnown RBP16.51■□□□□ 0.23
SRSF1-206ENST00000583741 RNASE12Q5GAN4 147 aaKnown RBP16.51■□□□□ 0.23
SRSF1-206ENST00000583741 LIAT1Q6ZQX7 453 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 C6orf201Q7Z4U5 140 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 OR4S1Q8NGB4 309 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 WIPF2Q8TF74 440 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-206ENST00000583741 SMIM4Q8WVI0 70 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 R3HDM4Q96D70 268 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 SDSLQ96GA7 329 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 IFT22Q9H7X7 185 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 SPACA1Q9HBV2 294 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.51■□□□□ 0.23
SRSF1-206ENST00000583741 KCNK7Q9Y2U2 307 aa16.51■□□□□ 0.23
SRSF1-206ENST00000583741 GABARAPH6UMI1 98 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 SH2D1BO14796 132 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 ZNF44P15621 663 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 COX7A1P24310 79 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 BAK1Q16611 211 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 DYNAPQ8N1N2 210 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 FCAMRQ8WWV6 532 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 ABCB10Q9NRK6 738 aa16.5■□□□□ 0.23
SRSF1-206ENST00000583741 RCC2Q9P258 522 aaKnown RBP16.5■□□□□ 0.23
SRSF1-206ENST00000583741 ELF5Q9UKW6 265 aaPredicted RBP16.5■□□□□ 0.23
SRSF1-206ENST00000583741 DNAH9Q9NYC9 4486 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 SERPINE3A8MV23 424 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 DEGS1O15121 323 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 GSTZ1O43708 216 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-206ENST00000583741 UPK1BO75841 260 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 OR2H2O95918 312 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 HAND1O96004 215 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 PNLIPRP3Q17RR3 467 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 HACD4Q5VWC8 232 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 Q6P435 159 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 CCBE1Q6UXH8 406 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-206ENST00000583741 LHFPL4Q7Z7J7 247 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 NDUFA11Q86Y39 141 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 Q8N2B8 174 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 OR52I2Q8NH67 350 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 CITED2Q99967 270 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-206ENST00000583741 THAP7Q9BT49 309 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-206ENST00000583741 SCPEP1Q9HB40 452 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 PALMDQ9NP74 551 aa16.49■□□□□ 0.23
SRSF1-206ENST00000583741 RFPL4AA6NLU0 287 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 RFPL4AL1F8VTS6 287 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 SIRPB1O00241 398 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 IL7P13232 177 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 CCL3L1P16619 93 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 CEBPDP49716 269 aaPredicted RBP16.48■□□□□ 0.23
SRSF1-206ENST00000583741 RAB13P51153 203 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 GNG2P59768 71 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 ARFRP1Q13795 201 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 PLA1AQ53H76 456 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 TRIQKQ629K1 86 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 NUDCD2Q8WVJ2 157 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 CYYR1Q96J86 154 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 SULT4A1Q9BR01 284 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 FAAP24Q9BTP7 215 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 HEXA-AS1Q9H8Q6 139 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 TRAV24A0A0B4J272 114 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 VGLL3A8MV65 326 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 SULT1C2O00338 296 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 LPLP06858 475 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 CD3GP09693 182 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 RPL31P62899 125 aaKnown RBP16.48■□□□□ 0.23
SRSF1-206ENST00000583741 TMEM200BQ69YZ2 307 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 TMEM219Q86XT9 240 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 CD177Q8N6Q3 437 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 SUMF2Q8NBJ7 301 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 OR4F17Q8NGA8 305 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 GPX8Q8TED1 209 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 TRIM63Q969Q1 353 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 OR4F4Q96R69 305 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 TCF19Q9Y242 345 aa16.48■□□□□ 0.23
SRSF1-206ENST00000583741 UBE2QL1A1L167 161 aa16.47■□□□□ 0.23
SRSF1-206ENST00000583741 MCRIP1C9JLW8 97 aa16.47■□□□□ 0.23
SRSF1-206ENST00000583741 SLC33A1O00400 549 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-206ENST00000583741 HSPB6O14558 160 aa16.47■□□□□ 0.23
SRSF1-206ENST00000583741 CA11O75493 328 aa16.47■□□□□ 0.23
SRSF1-206ENST00000583741 LGALS4P56470 323 aa16.47■□□□□ 0.23
SRSF1-206ENST00000583741 ZNF782Q6ZMW2 699 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-206ENST00000583741 NEK7Q8TDX7 302 aa16.47■□□□□ 0.23
SRSF1-206ENST00000583741 DPCDQ9BVM2 203 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-206ENST00000583741 MEIS3P1A6NDR6 274 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 GLAP06280 429 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 PRDX2P32119 198 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 INPP1P49441 399 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 MRPS15P82914 257 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms