RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 TGIF2LXQ8IUE1 241 aa16.13■□□□□ 0.17
SHMT1-209ENST00000582653 Q8N9W7 124 aa16.13■□□□□ 0.17
SHMT1-209ENST00000582653 MND1Q9BWT6 205 aa16.13■□□□□ 0.17
SHMT1-209ENST00000582653 GPR61Q9BZJ8 451 aa16.13■□□□□ 0.17
SHMT1-209ENST00000582653 VCXQ9H320 206 aa16.13■□□□□ 0.17
SHMT1-209ENST00000582653 PLSCR3Q9NRY6 295 aa16.13■□□□□ 0.17
SHMT1-209ENST00000582653 WI2-2373I1.2A0A1W2PRP0 233 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 H0YHG0 523 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 PDCD6O75340 191 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 CA11O75493 328 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 CD1BP29016 333 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 MYCNOSP40205 109 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 GNMTQ14749 295 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 Q3ZCU0 254 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 NKAPLQ5M9Q1 402 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 OR2W3Q7Z3T1 314 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 FOXRED2Q8IWF2 684 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 STPG2Q8N412 459 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 OR52L2PQ8NGH6 319 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 MRPL30Q8TCC3 161 aaKnown RBP16.12■□□□□ 0.17
SHMT1-209ENST00000582653 THRSPQ92748 146 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 ABCG5Q9H222 651 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 RAB9BQ9NP90 201 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 OR2S2Q9NQN1 319 aa16.12■□□□□ 0.17
SHMT1-209ENST00000582653 MBNL3Q9NUK0 354 aaKnown RBP16.12■□□□□ 0.17
SHMT1-209ENST00000582653 LSM2Q9Y333 95 aaKnown RBP16.12■□□□□ 0.17
SHMT1-209ENST00000582653 MOSP00540 346 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 GLAP06280 429 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 GPR12P47775 334 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 ZNF137PP52743 207 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 F2RL1P55085 397 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 SPHARQ15513 63 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 MORN2Q502X0 79 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 RBM48Q5RL73 367 aaKnown RBP16.11■□□□□ 0.17
SHMT1-209ENST00000582653 RNLSQ5VYX0 342 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 TRAT1Q6PIZ9 186 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 C8orf86Q6ZUL3 223 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 CEACAM19Q7Z692 300 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 MS4A15Q8N5U1 240 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 NRG4Q8WWG1 115 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 MCRIP2Q9BUT9 160 aaKnown RBP16.11■□□□□ 0.17
SHMT1-209ENST00000582653 CST11Q9H112 138 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 KCNK15Q9H427 330 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 DCLRE1BQ9H816 532 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 LIN7CQ9NUP9 197 aaKnown RBP16.11■□□□□ 0.17
SHMT1-209ENST00000582653 GHRLQ9UBU3 117 aa16.11■□□□□ 0.17
SHMT1-209ENST00000582653 VSIG8P0DPA2 414 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 HOXD3P31249 432 aaPredicted RBP16.1■□□□□ 0.17
SHMT1-209ENST00000582653 MED22Q15528 200 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 TMEM30BQ3MIR4 351 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 VAX1Q5SQQ9 334 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 S1PR3Q99500 378 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 SULT4A1Q9BR01 284 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 FAAP24Q9BTP7 215 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 KCNIP1Q9NZI2 227 aa16.1■□□□□ 0.17
SHMT1-209ENST00000582653 NUDT19A8MXV4 375 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 SRMP19623 302 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 CHATP28329 748 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 PPP1CCP36873 323 aaKnown RBP16.09■□□□□ 0.17
SHMT1-209ENST00000582653 AQP4P55087 323 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 C1orf100Q5SVJ3 147 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 GLT8D1Q68CQ7 371 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 TEX38Q6PEX7 206 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 LCNL1Q6ZST4 164 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 KLHL30-AS1Q8NEE0 82 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 DPF1Q92782 380 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 TMEM203Q969S6 136 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 P2RX4Q99571 388 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 RASL11BQ9BPW5 248 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 HSPB9Q9BQS6 159 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 GON7Q9BXV9 100 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 SCN3BQ9NY72 215 aa16.09■□□□□ 0.17
SHMT1-209ENST00000582653 AP4M1O00189 453 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 TXNL1O43396 289 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 UBBP0CG47 229 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 HTR2CP28335 458 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 RPS27AP62979 156 aaKnown RBP16.08■□□□□ 0.16
SHMT1-209ENST00000582653 IRF3Q14653 427 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 PNLIPRP3Q17RR3 467 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 HSD17B12Q53GQ0 312 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 LIPKQ5VXJ0 399 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 STEAP3Q658P3 488 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 C6orf201Q7Z4U5 140 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 ZNF695Q8IW36 515 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 PHYHIPQ92561 330 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 DUX3Q96PT4 197 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 NEDD4LQ96PU5 975 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 NICN1Q9BSH3 213 aa16.08■□□□□ 0.16
SHMT1-209ENST00000582653 LANCL1O43813 399 aa16.07■□□□□ 0.16
SHMT1-209ENST00000582653 UNC119Q13432 240 aa16.07■□□□□ 0.16
SHMT1-209ENST00000582653 ODF3L1Q8IXM7 274 aa16.07■□□□□ 0.16
SHMT1-209ENST00000582653 FAM71E2Q8N5Q1 922 aa16.07■□□□□ 0.16
SHMT1-209ENST00000582653 OR8H1Q8NGG4 311 aa16.07■□□□□ 0.16
SHMT1-209ENST00000582653 ZMAT5Q9UDW3 170 aaKnown RBP16.07■□□□□ 0.16
SHMT1-209ENST00000582653 JPT1Q9UK76 154 aa16.07■□□□□ 0.16
SHMT1-209ENST00000582653 DNAH9Q9NYC9 4486 aa16.06■□□□□ 0.16
SHMT1-209ENST00000582653 RPLP1P05386 114 aaKnown RBP16.06■□□□□ 0.16
SHMT1-209ENST00000582653 UCHL1P09936 223 aa16.06■□□□□ 0.16
SHMT1-209ENST00000582653 LSAMPQ13449 338 aa16.06■□□□□ 0.16
SHMT1-209ENST00000582653 ZNF554Q86TJ5 538 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms