RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 FAM71F2Q6NXP2 309 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 C10orf99Q6UWK7 81 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 MOB3BQ86TA1 216 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 CT45A3Q8NHU0 189 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 TFAP2CQ92754 450 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 S1PR3Q99500 378 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 VCXQ9H320 206 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 GNG12Q9UBI6 72 aa11.42□□□□□ -0.58
SMARCE1-216ENST00000580419 YPEL1O60688 119 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 RGS11O94810 467 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 IGHV3-7P01780 117 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 IGHG4P01861 327 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 GNAO1P09471 354 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 CFHR3Q02985 330 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 KIR2DS1Q14954 304 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 RCN1Q15293 331 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 LTC4SQ16873 150 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 MORN2Q502X0 79 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 ZNF329Q86UD4 541 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 ZNF695Q8IW36 515 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 ORAI1Q96D31 301 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 YPEL2Q96QA6 119 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 MND1Q9BWT6 205 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 SELENOIQ9C0D9 397 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 KCNIP1Q9NZI2 227 aa11.41□□□□□ -0.58
SMARCE1-216ENST00000580419 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 SH2D7A6NKC9 451 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 NCBP2LA6PVI3 153 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 BPNT1O95861 308 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 PRB2P02812 416 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 ZNF134P52741 427 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 HNF4GQ14541 408 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 KHDC1LQ5JSQ8 128 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 AHSA2Q719I0 299 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 KCNG3Q8TAE7 436 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 CCDC107Q8WV48 283 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 TM2D1Q9BX74 207 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 RIMS4Q9H426 269 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 TAF9BQ9HBM6 251 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.58
SMARCE1-216ENST00000580419 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 A0A1W2PPE3 182 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 K7EIL1 84 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 RAMP3O60896 148 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 CRTAPO75718 401 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 MAS1P04201 325 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 CDK1P06493 297 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 RCC1P18754 421 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 CHATP28329 748 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 SOX6P35712 828 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 REG1BP48304 166 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 LSAMPQ13449 338 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 ACSM3Q53FZ2 586 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 CXorf66Q5JRM2 361 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 GLT8D1Q68CQ7 371 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 ZFP41Q8N8Y5 198 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 OR8U1Q8NH10 309 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 MYOZ3Q8TDC0 251 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 GALMQ96C23 342 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 RASL11BQ9BPW5 248 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 DCLRE1BQ9H816 532 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 OR2S2Q9NQN1 319 aa11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 LSM2Q9Y333 95 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-216ENST00000580419 SLC22A1O15245 554 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 NAPSAO96009 420 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 PSMB8P28062 276 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 RPS27AP62979 156 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 RUNX1Q01196 453 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 SPHARQ15513 63 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 TRAM1Q15629 374 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 HMGN3Q15651 99 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 ZNF880Q6PDB4 577 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 ZNF833PQ6ZTB9 187 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 MOB1BQ7L9L4 216 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 BPIFB6Q8NFQ5 453 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 OR4K15Q8NH41 348 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 MRPL30Q8TCC3 161 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 NEDD4LQ96PU5 975 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 ABHD14AQ9BUJ0 271 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 BANF2Q9H503 90 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 ISYNA1Q9NPH2 558 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 MGAT4AQ9UM21 535 aa11.38□□□□□ -0.59
SMARCE1-216ENST00000580419 A0A1W2PPK0 400 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 CCL24O00175 119 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 SLC31A2O15432 143 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 UCHL1P09936 223 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 SRMP19623 302 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 PSMA1P25786 263 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 CRIP2P52943 208 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 KRTAP10-11P60412 298 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 QRFPP83859 136 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 FHL3Q13643 280 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 C8orf86Q6ZUL3 223 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 LRRTM1Q86UE6 522 aa11.37□□□□□ -0.59
SMARCE1-216ENST00000580419 ODF3L1Q8IXM7 274 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms