RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 MRPS15P82914 257 aaKnown RBP13.21□□□□□ -0.29
IFT20-210ENST00000580357 ZNF880Q6PDB4 577 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 PRR18Q8N4B5 295 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 CAPSLQ8WWF8 208 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 LEAP2Q969E1 77 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 CENPOQ9BU64 300 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 PECRQ9BY49 303 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 JPT1Q9UK76 154 aa13.21□□□□□ -0.29
IFT20-210ENST00000580357 LOC100506127A0A0U1RQW1 187 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 TRIM64CA6NLI5 447 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 YPEL1O60688 119 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 SCGNO76038 276 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 IGHV3-7P01780 117 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 MORN2Q502X0 79 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 CCBE1Q6UXH8 406 aaPredicted RBP13.2□□□□□ -0.3
IFT20-210ENST00000580357 SLC25A48Q6ZT89 311 aaKnown RBP13.2□□□□□ -0.3
IFT20-210ENST00000580357 CROCCP3Q8IVE0 287 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 OR10R2Q8NGX6 335 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 OR1L1Q8NH94 360 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 RAB3CQ96E17 227 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 ARHGAP5-AS1Q96IT6 56 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 YPEL2Q96QA6 119 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 CMSS1Q9BQ75 279 aaKnown RBP13.2□□□□□ -0.3
IFT20-210ENST00000580357 PRSS22Q9GZN4 317 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 AK3Q9UIJ7 227 aa13.2□□□□□ -0.3
IFT20-210ENST00000580357 ZNF816Q0VGE8 651 aaPredicted RBP13.19□□□□□ -0.3
IFT20-210ENST00000580357 HMGN3Q15651 99 aa13.19□□□□□ -0.3
IFT20-210ENST00000580357 UTF1Q5T230 341 aa13.19□□□□□ -0.3
IFT20-210ENST00000580357 NR2C2APQ86WQ0 139 aa13.19□□□□□ -0.3
IFT20-210ENST00000580357 TAF15Q92804 592 aaKnown RBP eCLIP13.19□□□□□ -0.3
IFT20-210ENST00000580357 GHITMQ9H3K2 345 aa13.19□□□□□ -0.3
IFT20-210ENST00000580357 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
IFT20-210ENST00000580357 DAPK2Q9UIK4 370 aa13.19□□□□□ -0.3
IFT20-210ENST00000580357 IGHV3-43A0A0B4J1X8 118 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 FAM90A9PA6NNJ1 464 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 SERPINE3A8MV23 424 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 M0QZK8 103 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 TXNL1O43396 289 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 AIREO43918 545 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 CD3GP09693 182 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 IGHV3-43DP0DP04 118 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 PROK1P58294 105 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 CT45A1Q5HYN5 189 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 SFXN4Q6P4A7 337 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 CT45A3Q8NHU0 189 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 UBALD1Q8TB05 177 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 SETD6Q8TBK2 473 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 YIPF6Q96EC8 236 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 RBM14Q96PK6 669 aaKnown RBP13.18□□□□□ -0.3
IFT20-210ENST00000580357 ATG5Q9H1Y0 275 aa13.18□□□□□ -0.3
IFT20-210ENST00000580357 A0A1W2PPE3 182 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 RAB27BO00194 218 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 HSD17B6O14756 317 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 OR2F2O95006 317 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 SLC2A2P11168 524 aaPredicted RBP13.17□□□□□ -0.3
IFT20-210ENST00000580357 ZNF137PP52743 207 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 TMEM219Q86XT9 240 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 Q8N2B8 174 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 ZNF439Q8NDP4 499 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 ST6GALNAC6Q969X2 333 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 PHF21AQ96BD5 680 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 Q9N2K0 584 aa13.17□□□□□ -0.3
IFT20-210ENST00000580357 ITGB1BP1O14713 200 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 TIMM23O14925 209 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 CHST1O43916 411 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
IFT20-210ENST00000580357 ZBTB25P24278 435 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 CD1BP29016 333 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 EFNB2P52799 333 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 MXD1Q05195 221 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 SRSF7Q16629 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
IFT20-210ENST00000580357 MOB3BQ86TA1 216 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 OR10V1Q8NGI7 309 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 IL1F10Q8WWZ1 152 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 ETV7Q9Y603 341 aa13.16□□□□□ -0.3
IFT20-210ENST00000580357 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 A0A1W2PPI3 338 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 SMIM30A4D0T7 59 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 TRDCB7Z8K6 153 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 LANCL1O43813 399 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 TALDO1P37837 337 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 ZNF134P52741 427 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 PITPNAQ00169 270 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 PLA2G7Q13093 441 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 HABP2Q14520 560 aaPredicted RBP13.15□□□□□ -0.3
IFT20-210ENST00000580357 DRAM1Q8N682 238 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
IFT20-210ENST00000580357 CITED1Q99966 193 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 SLC25A33Q9BSK2 321 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 ABHD14AQ9BUJ0 271 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 RNF167Q9H6Y7 350 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.15□□□□□ -0.3
IFT20-210ENST00000580357 KCNK7Q9Y2U2 307 aa13.15□□□□□ -0.3
IFT20-210ENST00000580357 A0A0B4J203 849 aa13.14□□□□□ -0.31
IFT20-210ENST00000580357 HSPA12AO43301 675 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms