RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, human

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RARA-209	ENST00000579727	FUNDC2	Q9BWH2	189 aa		13.14	□□□□□ -0.31
RARA-209	ENST00000579727	HSF4	Q9ULV5	492 aa		13.14	□□□□□ -0.31
RARA-209	ENST00000579727		A6NDX4	124 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	NDUFA7	O95182	113 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	RAB6A	P20340	208 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	OR52M1	Q8NGK5	317 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	OR4F5	Q8NH21	305 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	IL1F10	Q8WWZ1	152 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	CMSS1	Q9BQ75	279 aa	Known RBP	13.13	□□□□□ -0.31
RARA-209	ENST00000579727	RAB9B	Q9NP90	201 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	C12orf4	Q9NQ89	552 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	OR2S2	Q9NQN1	319 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	ELF5	Q9UKW6	265 aa	Predicted RBP	13.13	□□□□□ -0.31
RARA-209	ENST00000579727	SIGLEC9	Q9Y336	463 aa		13.13	□□□□□ -0.31
RARA-209	ENST00000579727	HSD17B6	O14756	317 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	DYNLT3	P51808	116 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	ZNF134	P52741	427 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	RPL15	P61313	204 aa	Known RBP	13.12	□□□□□ -0.31
RARA-209	ENST00000579727	MADCAM1	Q13477	382 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	ZNF880	Q6PDB4	577 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	SLC16A12	Q6ZSM3	486 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	ZNF439	Q8NDP4	499 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	OR13F1	Q8NGS4	319 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	OR5H6	Q8NGV6	325 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	LINC01006	Q8NI28	216 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	MAFIP	Q8WZ33	124 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	CREB3L1	Q96BA8	519 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	RBMXL1	Q96E39	390 aa	Known RBP	13.12	□□□□□ -0.31
RARA-209	ENST00000579727	BEX1	Q9HBH7	125 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727	KCNK7	Q9Y2U2	307 aa		13.12	□□□□□ -0.31
RARA-209	ENST00000579727		A0A1W2PPI3	338 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	METTL21EP	A6NDL7	271 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	RAB27B	O00194	218 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	MFNG	O00587	321 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	TIMM23	O14925	209 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	HIST1H1D	P16402	221 aa	Known RBP	13.11	□□□□□ -0.31
RARA-209	ENST00000579727	BRS3	P32247	399 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	RPS19	P39019	145 aa	Known RBP	13.11	□□□□□ -0.31
RARA-209	ENST00000579727	MNDA	P41218	407 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	NCS1	P62166	190 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	HLA-DRB3	P79483	266 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	SRSF4	Q08170	494 aa	Known RBP	13.11	□□□□□ -0.31
RARA-209	ENST00000579727	CT45A1	Q5HYN5	189 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	MOB1B	Q7L9L4	216 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	OR56B4	Q8NH76	319 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	CT45A3	Q8NHU0	189 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	PTX4	Q96A99	478 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	GALM	Q96C23	342 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	MRPS26	Q9BYN8	205 aa	Known RBP	13.11	□□□□□ -0.31
RARA-209	ENST00000579727	NAA50	Q9GZZ1	169 aa	Known RBP	13.11	□□□□□ -0.31
RARA-209	ENST00000579727	ABRACL	Q9P1F3	81 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	JPT1	Q9UK76	154 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	PITPNC1	Q9UKF7	332 aa		13.11	□□□□□ -0.31
RARA-209	ENST00000579727	TRBV6-6	A0A0A6YYG2	114 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	CLPSL1	A2RUU4	121 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	SCT	P09683	121 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	CD3G	P09693	182 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	ARHGDIB	P52566	201 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	VBP1	P61758	197 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	MRPS15	P82914	257 aa	Known RBP	13.1	□□□□□ -0.31
RARA-209	ENST00000579727	HABP2	Q14520	560 aa	Predicted RBP	13.1	□□□□□ -0.31
RARA-209	ENST00000579727	TMEM30B	Q3MIR4	351 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	MORN2	Q502X0	79 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	CCDC144NL	Q6NUI1	221 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	LIAT1	Q6ZQX7	453 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	SLC25A48	Q6ZT89	311 aa	Known RBP	13.1	□□□□□ -0.31
RARA-209	ENST00000579727	ZNF554	Q86TJ5	538 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	IZUMO1	Q8IYV9	350 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	LINC00311	Q8N616	119 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	DRAM1	Q8N682	238 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	OR4C13	Q8NGP0	309 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	CAPSL	Q8WWF8	208 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	CFHR4	Q92496	578 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	OCSTAMP	Q9BR26	566 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	PARP12	Q9H0J9	701 aa	Known RBP	13.1	□□□□□ -0.31
RARA-209	ENST00000579727	RIMS4	Q9H426	269 aa	Predicted RBP	13.1	□□□□□ -0.31
RARA-209	ENST00000579727		Q9N2K0	584 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	RAB18	Q9NP72	206 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	RHBDL2	Q9NX52	303 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	OR1A1	Q9P1Q5	309 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	RNF114	Q9Y508	228 aa		13.1	□□□□□ -0.31
RARA-209	ENST00000579727	IGHV3-72	A0A0B4J1Y9	119 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	OOSP1	A8MZH6	123 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	SNRNP70	P08621	437 aa	Known RBP	13.09	□□□□□ -0.31
RARA-209	ENST00000579727	FCGR3A	P08637	254 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	SERPINB10	P48595	397 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	HTD2	P86397	168 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	ARFRP1	Q13795	201 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	MOB3B	Q86TA1	216 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	LYG1	Q8N1E2	194 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	SLC25A38	Q96DW6	304 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	ABHD14A	Q9BUJ0	271 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	ZNF747	Q9BV97	191 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	SLC23A1	Q9UHI7	598 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.09	□□□□□ -0.31
RARA-209	ENST00000579727	MMP24	Q9Y5R2	645 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	PKD1L1	Q8TDX9	2849 aa		13.09	□□□□□ -0.31
RARA-209	ENST00000579727	IGHV1-3	A0A0C4DH29	117 aa		13.08	□□□□□ -0.32
RARA-209	ENST00000579727	SH2D7	A6NKC9	451 aa	Predicted RBP	13.08	□□□□□ -0.32
RARA-209	ENST00000579727	ST8SIA5	O15466	376 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms