RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 TRAT1Q6PIZ9 186 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 TMEM219Q86XT9 240 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 MALSU1Q96EH3 234 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 OR1A1Q9P1Q5 309 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 DPM3Q9P2X0 92 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 VPREB3Q9UKI3 123 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 SPATA2Q9UM82 520 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 POMT1Q9Y6A1 747 aa17.49■□□□□ 0.39
CDC42EP4-203ENST00000578516 IGKV1D-8A0A087WSZ0 117 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 TRBV6-6A0A0A6YYG2 114 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 IGKV1-6A0A0C4DH72 117 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 CHST1O43916 411 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 RANBP1P43487 201 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 RPL5P46777 297 aaKnown RBP17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 REG1BP48304 166 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 ARFRP1Q13795 201 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 CDNFQ49AH0 187 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 CCBE1Q6UXH8 406 aaPredicted RBP17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 TMEM86BQ8N661 226 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 DPAGT1Q9H3H5 408 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 OR2S2Q9NQN1 319 aa17.48■□□□□ 0.39
CDC42EP4-203ENST00000578516 COL6A5A8TX70 2615 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 SSX5O60225 188 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 EIF4EP06730 217 aaKnown RBP17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 PRRX1P54821 245 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 HERPUD1Q15011 391 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 ZNF260Q3ZCT1 412 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 CT45A1Q5HYN5 189 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 MOB1BQ7L9L4 216 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 SAMD12Q8N8I0 201 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 OR52M1Q8NGK5 317 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 CT45A3Q8NHU0 189 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 ZFAND2BQ8WV99 257 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 GCDHQ92947 438 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 TOMM40LQ969M1 308 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 ABRACLQ9P1F3 81 aa17.47■□□□□ 0.39
CDC42EP4-203ENST00000578516 TRAV18A0A075B6X5 111 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 BTBD17A6NE02 478 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 LEUTXA8MZ59 168 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 FCER2P06734 321 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 MORN2Q502X0 79 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 OR10X1Q8NGY0 326 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 COMMD3Q9UBI1 195 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 SCOCQ9UIL1 159 aa17.46■□□□□ 0.39
CDC42EP4-203ENST00000578516 A0A1W2PPI3 338 aa17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 SCAND1P57086 179 aa17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 RPEQ96AT9 228 aa17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 GALMQ96C23 342 aa17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 C1RLQ9NZP8 487 aa17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 SLC23A1Q9UHI7 598 aa17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 JPT1Q9UK76 154 aa17.45■□□□□ 0.38
CDC42EP4-203ENST00000578516 SERPINE3A8MV23 424 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 VGLL3A8MV65 326 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 ST8SIA5O15466 376 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 GSTT2P0CG29 244 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 GSTT2BP0CG30 244 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 HKR1P10072 659 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 UBE2NLQ5JXB2 153 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 SLC25A48Q6ZT89 311 aaKnown RBP17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 ZNF554Q86TJ5 538 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 CROCCP3Q8IVE0 287 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 OR5R1Q8NH85 324 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 RIMS4Q9H426 269 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 ABCB10Q9NRK6 738 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 TCF19Q9Y242 345 aa17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 AMMECR1Q9Y4X0 333 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-203ENST00000578516 IGHV3-72A0A0B4J1Y9 119 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 A6NDX4 124 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 HSD17B6O14756 317 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 TIMM23O14925 209 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 HPGDSO60760 199 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 MDKP21741 143 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 MRPS15P82914 257 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 HTD2P86397 168 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 IGSF11Q5DX21 431 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 HACD4Q5VWC8 232 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 LINC00311Q8N616 119 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 OR56B4Q8NH76 319 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 ABHD14AQ9BUJ0 271 aa17.43■□□□□ 0.38
CDC42EP4-203ENST00000578516 TMEM89A2RUT3 159 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 MEIS3P1A6NDR6 274 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 TRDCB7Z8K6 153 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 H3BMQ9 156 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 FABP7O15540 132 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 GSTP1P09211 210 aaKnown RBP17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 GNG2P59768 71 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 DHRS7BQ6IAN0 325 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 ODF3L1Q8IXM7 274 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 LYG1Q8N1E2 194 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 DRAM1Q8N682 238 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 CFHR4Q92496 578 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 ST6GALNAC6Q969X2 333 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 ISOC1Q96CN7 298 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 OCSTAMPQ9BR26 566 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 IFI27L2Q9H2X8 130 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 RAB9BQ9NP90 201 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 CEPT1Q9Y6K0 416 aa17.42■□□□□ 0.38
CDC42EP4-203ENST00000578516 YPEL1O60688 119 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 TALDO1P37837 337 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms