RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 A8MUU9 505 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 LEUTXA8MZ59 168 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 IFNA5P01569 189 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 TNNC2P02585 160 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 ATP5G1P05496 136 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 CALB1P05937 261 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 PFN1P07737 140 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 CGB3P0DN86 165 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 CGB7P0DN87 165 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 ZNF7P17097 686 aaPredicted RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 CD34P28906 385 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 RPL12P30050 165 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 AGTR1P30556 359 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 INPP1P49441 399 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 NKX2-5P52952 324 aaPredicted RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 H2BFSP57053 126 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 CXCR4P61073 352 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 SLC35A2P78381 396 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 MRPS15P82914 257 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 HPCAP84074 193 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 BSPH1Q075Z2 132 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 ENDOGQ14249 297 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 CASP8Q14790 479 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 RSU1Q15404 277 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 MAPK14Q16539 360 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 CLEC12BQ2HXU8 276 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 ACSM3Q53FZ2 586 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 SPIN4Q56A73 249 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 LDLRAD2Q5SZI1 272 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 HENMT1Q5T8I9 393 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 C8orf74Q6P047 294 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 LRRN1Q6UXK5 716 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 MTERF4Q7Z6M4 381 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 SLC51BQ86UW2 128 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 NAA40Q86UY6 237 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 YIPF7Q8N8F6 280 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 TMEM75Q8N9X5 138 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 FER1L6-AS1Q8NA97 138 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 OR51D1Q8NGF3 324 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 PIGXQ8TBF5 258 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 KCTD4Q8WVF5 259 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 TMBIM1Q969X1 311 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 PTH2Q96A98 100 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 GALMQ96C23 342 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 TLCD1Q96CP7 247 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 CCDC42Q96M95 316 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 EBNA1BP2Q99848 306 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 LCE3DQ9BYE3 92 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 MRPS26Q9BYN8 205 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 SLC22A4Q9H015 551 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 ALX4Q9H161 411 aaPredicted RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 OR51B6Q9H340 312 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 TXNIPQ9H3M7 391 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 UCK1Q9HA47 277 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 SPANXB1Q9NS25 103 aaPredicted RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 TMEM216Q9P0N5 145 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 DHCR7Q9UBM7 475 aaKnown RBP1.35□□□□□ -2.19
COPS3-213ENST00000577210 PHLDA3Q9Y5J5 127 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 TRAPPC1Q9Y5R8 145 aa1.35□□□□□ -2.19
COPS3-213ENST00000577210 ABCC11Q96J66 1382 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 C2orf16Q68DN1 1984 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 IGKV3D-11A0A0A0MRZ8 115 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 IGHV3-43A0A0B4J1X8 118 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 IGKV1-12A0A0C4DH73 117 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 SMIM23A6NLE4 172 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 TMEM250H0YL14 139 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 COPEO14579 308 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 MRASO14807 208 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 EEF1E1O43324 174 aaKnown RBP1.34□□□□□ -2.19
COPS3-213ENST00000577210 TGOLN2O43493 480 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 GPR75O95800 540 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 PDYNP01213 254 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 IGKV1D-12P01611 117 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 IGHG2P01859 326 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 IGHMP01871 453 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 REG1AP05451 166 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 CRYBA1P05813 215 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 OR4A8P0C604 315 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 PTHLHP12272 177 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 CTSEP14091 401 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 MIPP30301 263 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 CDKN2CP42773 168 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 PSMB3P49720 205 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 CEBPGP53567 150 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 TCL1AP56279 114 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 KLF3P57682 345 aaPredicted RBP1.34□□□□□ -2.19
COPS3-213ENST00000577210 MAGOHP61326 146 aaKnown RBP1.34□□□□□ -2.19
COPS3-213ENST00000577210 RPS11P62280 158 aaKnown RBP eCLIP1.34□□□□□ -2.19
COPS3-213ENST00000577210 MGAT3Q09327 533 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 TMEM267Q0VDI3 215 aaPredicted RBP1.34□□□□□ -2.19
COPS3-213ENST00000577210 PDK2Q15119 407 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 LRRC26Q2I0M4 334 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 TMEM69Q5SWH9 247 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 C1orf195Q5TG92 126 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 FAM104BQ5XKR9 115 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 EBLN2Q6P2I7 272 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 CD200R1LQ6Q8B3 271 aa1.34□□□□□ -2.19
COPS3-213ENST00000577210 C16orf47Q6ZP98 133 aaPredicted RBP1.34□□□□□ -2.19
COPS3-213ENST00000577210 C10orf67Q8IYJ2 551 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms