RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TRUB1Q8WWH5 349 aaKnown RBP6.91□□□□□ -1.3
SMG6-218ENST00000575454 THTPAQ9BU02 230 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 ANKRD60Q9BZ19 345 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 FAM192AQ9GZU8 254 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 SLA2Q9H6Q3 261 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 RANGRFQ9HD47 186 aaPredicted RBP6.91□□□□□ -1.3
SMG6-218ENST00000575454 ZNF446Q9NWS9 450 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 IL36GQ9NZH8 169 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 TRAPPC2LQ9UL33 140 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 IGHV3-43A0A0B4J1X8 118 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 SNTNA6NMZ2 147 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 C12orf77C9JDV5 145 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 J3QLW9 94 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 AIPO00170 330 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 GABRPO00591 440 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 SLC31A2O15432 143 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 CA11O75493 328 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 IGHV3-43DP0DP04 118 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 ZNF19P17023 458 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 ZNF134P52741 427 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 RBM11P57052 281 aaKnown RBP6.9□□□□□ -1.3
SMG6-218ENST00000575454 TATDN3Q17R31 274 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 MOGAT2Q3SYC2 334 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 AKIRIN2Q53H80 203 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 ACTBL2Q562R1 376 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 C19orf54Q5BKX5 351 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 ATAD3CQ5T2N8 411 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 CD200R1LQ6Q8B3 271 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 ACBD7Q8N6N7 88 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 OR10K1Q8NGX5 313 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 TSEN15Q8WW01 171 aaKnown RBP6.9□□□□□ -1.3
SMG6-218ENST00000575454 RHOVQ96L33 236 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 TMED9Q9BVK6 235 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 ING4Q9UNL4 249 aa6.9□□□□□ -1.3
SMG6-218ENST00000575454 A0A0G2JLM5 398 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 TCRBV3S1A0A5B6 114 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 MCRIP1C9JLW8 97 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 J3QRE1 110 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 GEMIN2O14893 280 aaKnown RBP6.89□□□□□ -1.31
SMG6-218ENST00000575454 SOX15O60248 233 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 RGS11O94810 467 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 NDUFA3O95167 84 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 IGHV3-11P01762 117 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 HBZP02008 142 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 CD2P06729 351 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 GTF2F2P13984 249 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 CNTFRP26992 372 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 TPPP2P59282 170 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 CX3CL1P78423 397 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 GPR176Q14439 515 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 PLGLAQ15195 96 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 SYT6Q5T7P8 510 aaPredicted RBP6.89□□□□□ -1.31
SMG6-218ENST00000575454 LPCAT4Q643R3 524 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 LCN12Q6JVE5 192 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 ZNF529Q6P280 563 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 ZNF554Q86TJ5 538 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 Q8N402 240 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 PRR18Q8N4B5 295 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 OR5AK2Q8NH90 309 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 UBALD1Q8TB05 177 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 ABHD5Q8WTS1 349 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 PELI1Q96FA3 418 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 C4orf36Q96KX1 117 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 ABHD14AQ9BUJ0 271 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 GABARAPL1Q9H0R8 117 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 OR2S2Q9NQN1 319 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 KCNIP1Q9NZI2 227 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 LRRC42Q9Y546 428 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 GMPPBQ9Y5P6 360 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 NUBP2Q9Y5Y2 271 aa6.89□□□□□ -1.31
SMG6-218ENST00000575454 SORL1Q92673 2214 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 C13orf42A0A1B0GVH6 325 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 RBMY1BA6NDE4 496 aaKnown RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 RBMY1EA6NEQ0 496 aaKnown RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 CDRT1O95170 752 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 TFAP2AP05549 437 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 RBMY1DP0C7P1 496 aaKnown RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 ZNF93P35789 620 aaPredicted RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 PPP3R1P63098 170 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 KLF5Q13887 457 aaPredicted RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 ATP6AP1Q15904 470 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 LY6G6FQ5SQ64 297 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 SLC25A30Q5SVS4 291 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 MEDAGQ5VYS4 303 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 FAM71F2Q6NXP2 309 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 ZNF562Q6V9R5 426 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 HAPLN4Q86UW8 402 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 PPP1R27Q86WC6 154 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 SYS1Q8N2H4 156 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 OR9G4Q8NGQ1 327 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 DDB2Q92466 427 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 MRPS24Q96EL2 167 aaKnown RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 RITA1Q96K30 269 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 RNF5Q99942 180 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 NABP2Q9BQ15 211 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 GABARAPL3Q9BY60 117 aa6.88□□□□□ -1.31
SMG6-218ENST00000575454 MRPL20Q9BYC9 149 aaKnown RBP6.88□□□□□ -1.31
SMG6-218ENST00000575454 HIPK2Q9H2X6 1198 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms