RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZNF221Q9UK13 617 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 PDZD2O15018 2839 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 LOC105371242A0A075B767 164 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 IGHV3-43A0A0B4J1X8 118 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 HSPA12AO43301 675 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 IGHV3-43DP0DP04 118 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 LCN2P80188 198 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 MRGPRFQ96AM1 343 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 GHITMQ9H3K2 345 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 GAL3ST2Q9H3Q3 398 aa19.8■□□□□ 0.76
ATPAF1-213ENST00000574428 PPIAL4CA0A0B4J2A2 164 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 NPIPB11E5RHQ5 1161 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 NDUFB6O95139 128 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 ZNF728P0DKX0 622 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 PPIAL4GP0DN37 164 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 ERVFRD-1P60508 538 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 RRAS2P62070 204 aaPredicted RBP19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 PRAMEF5Q5TYX0 476 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 KRTAP1-3Q8IUG1 177 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 OR13C8Q8NGS7 320 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 C8orf46Q8TAG6 207 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 GIMAP1Q8WWP7 306 aa19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 MAP1AP78559 2803 aaPredicted RBP19.79■□□□□ 0.76
ATPAF1-213ENST00000574428 PEX14O75381 377 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 MMP23AO75900 390 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 AADACP22760 399 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 DOCK11Q5JSL3 2073 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 DHRS11Q6UWP2 260 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 OR10V1Q8NGI7 309 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 LINC00574Q9H8X3 128 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 OR2S2Q9NQN1 319 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 ZNF69Q9UC07 566 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 FAM157AC9JC47 383 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 F2RL2O00254 374 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 ARPC1BO15143 372 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 USF1P22415 310 aaPredicted RBP19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 ZBTB25P24278 435 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 PPP1CCP36873 323 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 DLX6P56179 175 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 AADACL3Q5VUY0 350 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 CD276Q5ZPR3 534 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 LHFPL1Q86WI0 220 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 H1FOOQ8IZA3 346 aaPredicted RBP19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 LY6G5BQ8NDX9 201 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 TERB2Q8NHR7 220 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 BEX2Q9BXY8 128 aa19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 PARP12Q9H0J9 701 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-213ENST00000574428 OR5H14A6NHG9 310 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 DIRAS3O95661 229 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 HEXAP06865 529 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 FPR2P25090 351 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 CEACAM6P40199 344 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 HTD2P86397 168 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 RBMS2Q15434 407 aaKnown RBP19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 BEX1Q9HBH7 125 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 RANGRFQ9HD47 186 aaPredicted RBP19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 RAB9BQ9NP90 201 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 RDH8Q9NYR8 311 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 IDI2-AS1Q9NZ38 188 aa19.77■□□□□ 0.76
ATPAF1-213ENST00000574428 CSMD1Q96PZ7 3565 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 A8MXK9 166 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 LOXL3P58215 753 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 FXYD4P59646 89 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 CD83Q01151 205 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 UTF1Q5T230 341 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 LPAR2Q9HBW0 351 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 ONECUT1Q9UBC0 465 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 GNG12Q9UBI6 72 aa19.76■□□□□ 0.75
ATPAF1-213ENST00000574428 FAM172BPA6NC97 362 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 TUSC2O75896 110 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 PPYP01298 95 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 LIPFP07098 398 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 NFYBP25208 207 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 PRSS57Q6UWY2 283 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 Q96MF0 132 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 FXYD6Q9H0Q3 95 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 OR51J1Q9H342 316 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 A0A096LNT2 108 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 IGHV3-7P01780 117 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 HERV-K104P61576 105 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 BAMBIQ13145 260 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 CBX3Q13185 183 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 HEPN1Q6WQI6 88 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 MARCH1Q8TCQ1 289 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 LEAP2Q969E1 77 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 TOMM40LQ969M1 308 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 JPT1Q9UK76 154 aa19.75■□□□□ 0.75
ATPAF1-213ENST00000574428 A0A1W2PPH5 198 aa19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 FOXH1O75593 365 aa19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 MOB3AQ96BX8 217 aa19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 DMRTB1Q96MA1 342 aa19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 FYTTD1Q96QD9 318 aaKnown RBP19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 SLC25A21Q9BQT8 299 aaPredicted RBP19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 GFOD1Q9NXC2 390 aa19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 OR2W1Q9Y3N9 320 aa19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 YLPM1P49750 1951 aaKnown RBP19.74■□□□□ 0.75
ATPAF1-213ENST00000574428 ARHGAP32A7KAX9 2087 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 IGKV1D-13A0A0B4J2D9 117 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 RNF223E7ERA6 249 aa19.73■□□□□ 0.75
ATPAF1-213ENST00000574428 IGKV1-13P0DP09 117 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms