RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 AK3Q9UIJ7 227 aa22.19■■□□□ 1.14
SCARF1-207ENST00000573867 CMYA5Q8N3K9 4069 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 MNDAP41218 407 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 REG1BP48304 166 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 ARHGDIBP52566 201 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 CT45A1Q5HYN5 189 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 PLAC9Q5JTB6 97 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 PRR31Q5SQ13 230 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 HIST2H2BDQ6DRA6 164 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 ZNF554Q86TJ5 538 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 DRAM1Q8N682 238 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 CT45A3Q8NHU0 189 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 CAPSLQ8WWF8 208 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 ST6GALNAC6Q969X2 333 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 ARHGAP5-AS1Q96IT6 56 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 RNF167Q9H6Y7 350 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 ZNF696Q9H7X3 374 aa22.18■■□□□ 1.14
SCARF1-207ENST00000573867 HSD17B6O14756 317 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 SLC2A2P11168 524 aaPredicted RBP22.17■■□□□ 1.14
SCARF1-207ENST00000573867 TMEM30BQ3MIR4 351 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 MOGAT2Q3SYC2 334 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 Q3ZCU0 254 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 SLC25A48Q6ZT89 311 aaKnown RBP22.17■■□□□ 1.14
SCARF1-207ENST00000573867 RBM14Q96PK6 669 aaKnown RBP22.17■■□□□ 1.14
SCARF1-207ENST00000573867 SLC25A33Q9BSK2 321 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 PECRQ9BY49 303 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 LIN7BQ9HAP6 207 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 KCNIP1Q9NZI2 227 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 HSF4Q9ULV5 492 aa22.17■■□□□ 1.14
SCARF1-207ENST00000573867 AMY1AP04745 511 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 AMY2AP04746 511 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 SNRNP70P08621 437 aaKnown RBP22.16■■□□□ 1.14
SCARF1-207ENST00000573867 GADD45AP24522 165 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 RAB7AP51149 207 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 ZNF816Q0VGE8 651 aaPredicted RBP22.16■■□□□ 1.14
SCARF1-207ENST00000573867 TMEM95Q3KNT9 176 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 OR8H3Q8N146 312 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 KLHDC1Q8N7A1 406 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 RAB9BQ9NP90 201 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 OR2S2Q9NQN1 319 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 RAB22AQ9UL26 194 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 SSR3Q9UNL2 185 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 VWFP04275 2813 aa22.16■■□□□ 1.14
SCARF1-207ENST00000573867 OR2F2O95006 317 aa22.15■■□□□ 1.14
SCARF1-207ENST00000573867 PPP1CCP36873 323 aaKnown RBP22.15■■□□□ 1.14
SCARF1-207ENST00000573867 MORN2Q502X0 79 aa22.15■■□□□ 1.14
SCARF1-207ENST00000573867 C16orf82Q7Z2V1 217 aa22.15■■□□□ 1.14
SCARF1-207ENST00000573867 CHCHD6Q9BRQ6 235 aa22.15■■□□□ 1.14
SCARF1-207ENST00000573867 PRSS22Q9GZN4 317 aa22.15■■□□□ 1.14
SCARF1-207ENST00000573867 CHMP1AQ9HD42 196 aaPredicted RBP22.15■■□□□ 1.14
SCARF1-207ENST00000573867 KCNK7Q9Y2U2 307 aa22.15■■□□□ 1.14
SCARF1-207ENST00000573867 IGHV1-3A0A0C4DH29 117 aa22.14■■□□□ 1.13
SCARF1-207ENST00000573867 SH2D7A6NKC9 451 aaPredicted RBP22.14■■□□□ 1.13
SCARF1-207ENST00000573867 HTD2P86397 168 aa22.14■■□□□ 1.13
SCARF1-207ENST00000573867 Q6ZTK2 550 aa22.14■■□□□ 1.13
SCARF1-207ENST00000573867 THNSL2Q86YJ6 484 aa22.14■■□□□ 1.13
SCARF1-207ENST00000573867 OR56B1Q8NGI3 324 aa22.14■■□□□ 1.13
SCARF1-207ENST00000573867 RBMXL1Q96E39 390 aaKnown RBP22.14■■□□□ 1.13
SCARF1-207ENST00000573867 JPT1Q9UK76 154 aa22.14■■□□□ 1.13
SCARF1-207ENST00000573867 TRBV6-6A0A0A6YYG2 114 aa22.13■■□□□ 1.13
SCARF1-207ENST00000573867 IGHV3-72A0A0B4J1Y9 119 aa22.13■■□□□ 1.13
SCARF1-207ENST00000573867 CLEC2LP0C7M8 214 aa22.13■■□□□ 1.13
SCARF1-207ENST00000573867 CD36P16671 472 aa22.13■■□□□ 1.13
SCARF1-207ENST00000573867 ZNF137PP52743 207 aa22.13■■□□□ 1.13
SCARF1-207ENST00000573867 SETD6Q8TBK2 473 aa22.13■■□□□ 1.13
SCARF1-207ENST00000573867 RTN4IP1Q8WWV3 396 aaPredicted RBP22.13■■□□□ 1.13
SCARF1-207ENST00000573867 NOTOA8MTQ0 251 aa22.12■■□□□ 1.13
SCARF1-207ENST00000573867 GAPDHP04406 335 aaKnown RBP22.12■■□□□ 1.13
SCARF1-207ENST00000573867 VSIG10L2P0DP72 767 aa22.12■■□□□ 1.13
SCARF1-207ENST00000573867 C11orf88Q6PI97 169 aa22.12■■□□□ 1.13
SCARF1-207ENST00000573867 WIPF2Q8TF74 440 aaPredicted RBP22.12■■□□□ 1.13
SCARF1-207ENST00000573867 CENPOQ9BU64 300 aa22.12■■□□□ 1.13
SCARF1-207ENST00000573867 MGAM2Q2M2H8 2515 aa22.12■■□□□ 1.13
SCARF1-207ENST00000573867 RAB27BO00194 218 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 FAM106CPP0CH98 169 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 RAB6AP20340 208 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 SDC2P34741 201 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 MOB3BQ86TA1 216 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 C11orf44Q8N8P7 122 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 TSPAN14Q8NG11 270 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 GALMQ96C23 342 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 WNT10AQ9GZT5 417 aa22.11■■□□□ 1.13
SCARF1-207ENST00000573867 PARP12Q9H0J9 701 aaKnown RBP22.11■■□□□ 1.13
SCARF1-207ENST00000573867 LOC100506127A0A0U1RQW1 187 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 YPEL1O60688 119 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 TNFAIP8O95379 198 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 IGKV1D-33P01593 117 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 IGKV1-33P01594 117 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 RANBP1P43487 201 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 HNF4GQ14541 408 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 HERPUD1Q15011 391 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 ABCA11PQ4W5N1 156 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 MOB1BQ7L9L4 216 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 TPRA1Q86W33 373 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 ODF3L1Q8IXM7 274 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 IL1F10Q8WWZ1 152 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 KCTD7Q96MP8 289 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 YPEL2Q96QA6 119 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 ABHD14AQ9BUJ0 271 aa22.1■■□□□ 1.13
SCARF1-207ENST00000573867 RIMS4Q9H426 269 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms