RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
CACNA1A-202ENST00000573710 C10orf128Q5T292 105 aa13.97□□□□□ -0.17
CACNA1A-202ENST00000573710 DND1Q8IYX4 353 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-202ENST00000573710 TTC9CQ8N5M4 171 aa13.97□□□□□ -0.17
CACNA1A-202ENST00000573710 SLC25A40Q8TBP6 338 aa13.97□□□□□ -0.17
CACNA1A-202ENST00000573710 GPR27Q9NS67 375 aa13.97□□□□□ -0.17
CACNA1A-202ENST00000573710 TINAGQ9UJW2 476 aa13.97□□□□□ -0.17
CACNA1A-202ENST00000573710 RBFOX3A6NFN3 312 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 H3BTX0 84 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 CHST1O43916 411 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 INHBBP09529 407 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 TMEM240Q5SV17 173 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 KIRREL2Q6UWL6 708 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 NHLRC1Q6VVB1 395 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 ZNF770Q6IQ21 691 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 MAP1LC3AQ9H492 121 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 ALPK2Q86TB3 2170 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 C1orf220Q5T0J3 134 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 ZNF680Q8NEM1 530 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 TRAV8-6A0A0B4J262 113 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 OR10J1P30954 320 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 PMELP40967 661 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 OR10AC1Q8NH08 325 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 MANBALQ9NQG1 85 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 SLC25A37Q9NYZ2 338 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 SELENOKQ9Y6D0 94 aa13.96□□□□□ -0.17
CACNA1A-202ENST00000573710 EFNB1P98172 346 aa13.96□□□□□ -0.18
CACNA1A-202ENST00000573710 NDUFA3O95167 84 aa13.96□□□□□ -0.18
CACNA1A-202ENST00000573710 HIST1H4AP62805 103 aaKnown RBP13.96□□□□□ -0.18
CACNA1A-202ENST00000573710 PET117Q6UWS5 81 aa13.96□□□□□ -0.18
CACNA1A-202ENST00000573710 PSCAO43653 123 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 PRDX2P32119 198 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 PRICKLE4Q2TBC4 344 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 LRP10Q7Z4F1 713 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 SSC4DQ8WTU2 575 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 SOD3P08294 240 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 CFAP161Q6P656 301 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 RHOVQ96L33 236 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 PAXXQ9BUH6 204 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 PCMT1P22061 227 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 TM4SF4P48230 202 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 ASAH1Q13510 395 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 ANKRD33Q7Z3H0 272 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 NUBPLQ8TB37 319 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 WNT9BO14905 357 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 C9orf50Q5SZB4 431 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 PRELID3AQ96N28 172 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 TMEM56-RWDD3S4R434 201 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 FAM106CPP0CH98 169 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 GCAP28676 217 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 ASB5Q8WWX0 329 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 ZG16BQ96DA0 208 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 PDLIM5Q96HC4 596 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 NFAT5O94916 1531 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 NAT2P11245 290 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 MDH2P40926 338 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 WDFY1Q8IWB7 410 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 DEFB104AQ8WTQ1 72 aa13.95□□□□□ -0.18
CACNA1A-202ENST00000573710 STAG3L3P0CL85 134 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 PMS2CLQ68D20 193 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 MRGPRFQ96AM1 343 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 C1QTNF9BB2RNN3 333 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 ZIC3O60481 467 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 OR2A4O95047 310 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 VSIG10L2P0DP72 767 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 SKP2Q13309 424 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 PNLIPRP3Q17RR3 467 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 CADM3Q8N126 398 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 WFIKKN1Q96NZ8 548 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 OR2A7Q96R45 310 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 AMER3Q8N944 861 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 LSM10Q969L4 123 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 Q9N2K0 584 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 OR51B2Q9Y5P1 312 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 COL1A1P02452 1464 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 IGHV5-51A0A0C4DH38 117 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 CFDP00746 253 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 ZNF658BQ4V348 819 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 C11orf44Q8N8P7 122 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 OR4D5Q8NGN0 318 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 SPSB4Q96A44 273 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 HSPB9Q9BQS6 159 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 METTL1Q9UBP6 276 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 INSL4Q14641 139 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 ANAPC16Q96DE5 110 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 KCNK17Q96T54 332 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 WNT10AQ9GZT5 417 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 GDF9O60383 454 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 RAB40CQ96S21 281 aa13.94□□□□□ -0.18
CACNA1A-202ENST00000573710 LINC00862A6NCI5 91 aa13.93□□□□□ -0.18
CACNA1A-202ENST00000573710 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
CACNA1A-202ENST00000573710 BGLAPP02818 100 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms