RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RPEQ96AT9 228 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 RBM14Q96PK6 669 aaKnown RBP5.94□□□□□ -1.46
NUP88-205ENST00000572809 OR5M11Q96RB7 305 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 SLC25A33Q9BSK2 321 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 SELENOIQ9C0D9 397 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 BANF2Q9H503 90 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 SPACA1Q9HBV2 294 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 AMMECR1Q9Y4X0 333 aaPredicted RBP5.94□□□□□ -1.46
NUP88-205ENST00000572809 PEX16Q9Y5Y5 336 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 TRRAPQ9Y4A5 3859 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A10PA6NDY2 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A18PA6NE21 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A16PA6NEW6 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A20PA6NIJ5 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A7PA6NKC0 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A9PA6NNJ1 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A12PA8MX19 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A5PA8MXJ8 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A23PA8MXZ1 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 C15orf65H3BRN8 121 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 AIPO00170 330 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 SDCBPO00560 298 aaPredicted RBP5.93□□□□□ -1.46
NUP88-205ENST00000572809 KCNAB3O43448 404 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 CRTAPO75718 401 aaPredicted RBP5.93□□□□□ -1.46
NUP88-205ENST00000572809 OR2F2O95006 317 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 GLAP06280 429 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A15PP0C7V4 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A13PP0C7W8 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A14PP0C7W9 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FAM90A24PP0C7X0 464 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 CD28P10747 220 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 MGMTP16455 207 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 SRMP19623 302 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 PI3P19957 117 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 FUT3P21217 361 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 MYF6P23409 242 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 SSTR5P35346 364 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 VDAC2P45880 294 aaPredicted RBP5.93□□□□□ -1.46
NUP88-205ENST00000572809 GNG10P50151 68 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 RAB7AP51149 207 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 SLC35A2P78381 396 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 MADCAM1Q13477 382 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 DIAPH2-AS1Q14236 149 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 INSL4Q14641 139 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 IRF3Q14653 427 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 GAGE13Q4V321 117 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 ABCA11PQ4W5N1 156 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 SYT6Q5T7P8 510 aaPredicted RBP5.93□□□□□ -1.46
NUP88-205ENST00000572809 GLT8D1Q68CQ7 371 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 RAB12Q6IQ22 244 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 ZNF497Q6ZNH5 498 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 CEACAM19Q7Z692 300 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 CENPVQ7Z7K6 275 aaPredicted RBP5.93□□□□□ -1.46
NUP88-205ENST00000572809 LYG1Q8N1E2 194 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 NKAIN3Q8N8D7 197 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 OR52M1Q8NGK5 317 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 OR10X1Q8NGY0 326 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 SGCDQ92629 289 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 TOMM40LQ969M1 308 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 UQCC2Q9BRT2 126 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 TMED9Q9BVK6 235 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 VCX3BQ9H321 246 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 DUSP21Q9H596 190 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 ETAA1Q9NY74 926 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 RCC2Q9P258 522 aaKnown RBP5.93□□□□□ -1.46
NUP88-205ENST00000572809 GHRLQ9UBU3 117 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 TRAPPC2LQ9UL33 140 aa5.93□□□□□ -1.46
NUP88-205ENST00000572809 LSM2Q9Y333 95 aaKnown RBP5.93□□□□□ -1.46
NUP88-205ENST00000572809 IGHV3-43A0A0B4J1X8 118 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 A0A1W2PPE3 182 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 UBE2QL1A1L167 161 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 M0QZK8 103 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 SPINT2O43291 252 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 RGS10O43665 173 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 CA11O75493 328 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 GAPDHP04406 335 aaKnown RBP5.92□□□□□ -1.46
NUP88-205ENST00000572809 AMY1AP04745 511 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 UBBP0CG47 229 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 HSMCR30P0CW71 290 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 IGHV3-43DP0DP04 118 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 MALP21145 153 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 VHLP40337 213 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 LOXL3P58215 753 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 HES1Q14469 280 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 NSUN5P1Q3KNT7 163 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 HSD17B12Q53GQ0 312 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 RBM48Q5RL73 367 aaKnown RBP5.92□□□□□ -1.46
NUP88-205ENST00000572809 FAM27D1Q5T7N8 215 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 LIPKQ5VXJ0 399 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 LRRTM1Q86UE6 522 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 OR8H3Q8N146 312 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 DRAM1Q8N682 238 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 TMEM104Q8NE00 496 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 OR5AU1Q8NGC0 362 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 OR4K15Q8NH41 348 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 UBALD1Q8TB05 177 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 WIPF2Q8TF74 440 aaPredicted RBP5.92□□□□□ -1.46
NUP88-205ENST00000572809 PHYHIPQ92561 330 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 TMEM203Q969S6 136 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms