RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 MORN2Q502X0 79 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 C8orf59Q8N0T1 100 aaPredicted RBP14.2□□□□□ -0.14
CHD3-214ENST00000572579 STX19Q8N4C7 294 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 TFAP2CQ92754 450 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 DCLRE1BQ9H816 532 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 TAF9BQ9HBM6 251 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 C8orf4Q9NR00 106 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 GNG12Q9UBI6 72 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 CRTAPO75718 401 aaPredicted RBP14.19□□□□□ -0.14
CHD3-214ENST00000572579 DUS4LO95620 317 aaKnown RBP14.19□□□□□ -0.14
CHD3-214ENST00000572579 MYCNOSP40205 109 aa14.19□□□□□ -0.14
CHD3-214ENST00000572579 TAS2R43P59537 309 aa14.19□□□□□ -0.14
CHD3-214ENST00000572579 C11orf87Q6NUJ2 197 aa14.19□□□□□ -0.14
CHD3-214ENST00000572579 ZNF695Q8IW36 515 aa14.19□□□□□ -0.14
CHD3-214ENST00000572579 RNF152Q8N8N0 203 aa14.19□□□□□ -0.14
CHD3-214ENST00000572579 KLHL30-AS1Q8NEE0 82 aa14.19□□□□□ -0.14
CHD3-214ENST00000572579 KCNK15Q9H427 330 aa14.19□□□□□ -0.14
CHD3-214ENST00000572579 FAM90A10PA6NDY2 464 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 FAM90A7PA6NKC0 464 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 FAM90A23PA8MXZ1 464 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 ANKRD65E5RJM6 399 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 AP4M1O00189 453 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 SPINT2O43291 252 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 GLAP06280 429 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 CD37P11049 281 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 MED21Q13503 144 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 PNLIPRP3Q17RR3 467 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 DEFB136Q30KP8 78 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 ACSM3Q53FZ2 586 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 STEAP3Q658P3 488 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 FOXRED2Q8IWF2 684 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 SULT4A1Q9BR01 284 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 UQCC2Q9BRT2 126 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 OR2S2Q9NQN1 319 aa14.18□□□□□ -0.14
CHD3-214ENST00000572579 LSM2Q9Y333 95 aaKnown RBP14.18□□□□□ -0.14
CHD3-214ENST00000572579 NUDT19A8MXV4 375 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 H0YHG0 523 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 CCL24O00175 119 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 LANCL1O43813 399 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 PDCD6O75340 191 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 VSIG8P0DPA2 414 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 IL3RAP26951 378 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 CNTFRP26992 372 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 HTR2CP28335 458 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 PPP1CCP36873 323 aaKnown RBP14.17□□□□□ -0.14
CHD3-214ENST00000572579 QRFPP83859 136 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 LSAMPQ13449 338 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 KIAA0141Q14154 515 aaPredicted RBP14.17□□□□□ -0.14
CHD3-214ENST00000572579 DEFB121Q5J5C9 76 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 C6orf183Q5T699 404 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 TEX38Q6PEX7 206 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 COMMD1Q8N668 190 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 NKX1-2Q9UD57 310 aaPredicted RBP14.17□□□□□ -0.14
CHD3-214ENST00000572579 NBEAL2Q6ZNJ1 2754 aa14.17□□□□□ -0.14
CHD3-214ENST00000572579 A0A0A6YYD4 124 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 MYL12BO14950 172 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 CA11O75493 328 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 CDK1P06493 297 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 CHATP28329 748 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 OR3A3P47888 321 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 SLC35B1P78383 322 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 UNC119Q13432 240 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 GPR50Q13585 617 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 C1orf100Q5SVJ3 147 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 RNLSQ5VYX0 342 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 OR51D1Q8NGF3 324 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 GFI1Q99684 422 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 FAAP24Q9BTP7 215 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 MRPL20Q9BYC9 149 aaKnown RBP14.16□□□□□ -0.14
CHD3-214ENST00000572579 KLK15Q9H2R5 256 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 RYR3Q15413 4870 aa14.16□□□□□ -0.14
CHD3-214ENST00000572579 IGHG4P01861 327 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 SNRPBP14678 240 aaKnown RBP14.15□□□□□ -0.14
CHD3-214ENST00000572579 FOXE3Q13461 319 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 KIR2DS1Q14954 304 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 TMEM30BQ3MIR4 351 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 C6orf201Q7Z4U5 140 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 NKAIN3Q8N8D7 197 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 OR8H1Q8NGG4 311 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 RASL11BQ9BPW5 248 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 NABP2Q9BQ15 211 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 NICN1Q9BSH3 213 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 ZNF107Q9UII5 783 aaPredicted RBP14.15□□□□□ -0.14
CHD3-214ENST00000572579 ERGIC3Q9Y282 383 aa14.15□□□□□ -0.14
CHD3-214ENST00000572579 PTGES3LE9PB15 166 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 G3V318 75 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 IGF1P05019 195 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 SLC2A2P11168 524 aaPredicted RBP14.14□□□□□ -0.15
CHD3-214ENST00000572579 PSMB8P28062 276 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 SLC6A1P30531 599 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 SOX6P35712 828 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 CDX1P47902 265 aaPredicted RBP14.14□□□□□ -0.15
CHD3-214ENST00000572579 HTD2P86397 168 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 GABPB1Q06547 395 aaPredicted RBP14.14□□□□□ -0.15
CHD3-214ENST00000572579 IRF3Q14653 427 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 HMGN3Q15651 99 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 NKAPLQ5M9Q1 402 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 MYOZ3Q8TDC0 251 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 NRG4Q8WWG1 115 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 KCTD7Q96MP8 289 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms