RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 PLEKHJ1Q9NW61 149 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 NBEAL1Q6ZS30 2694 aa16.08■□□□□ 0.16
NUP88-204ENST00000572290 TRAV1-2A0A0B4J238 106 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 M0QZK8 103 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 SLC31A2O15432 143 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 TSPAN15O95858 294 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 MYL9P24844 172 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 PSMB9P28065 219 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 REG1BP48304 166 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 TMEM95Q3KNT9 176 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 SLC25A48Q6ZT89 311 aaKnown RBP16.07■□□□□ 0.16
NUP88-204ENST00000572290 MOB3BQ86TA1 216 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 FAM89BQ8N5H3 189 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 FAM3DQ96BQ1 224 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 CHMP1AQ9HD42 196 aaPredicted RBP16.07■□□□□ 0.16
NUP88-204ENST00000572290 MOB4Q9Y3A3 225 aa16.07■□□□□ 0.16
NUP88-204ENST00000572290 IGHV1-3A0A0C4DH29 117 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 SOCS1O15524 211 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 FBXO24O75426 580 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 CSF1P09603 554 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 TMEM11P17152 192 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 GALP22466 123 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 C2orf76Q3KRA6 126 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 CT45A1Q5HYN5 189 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 HES5Q5TA89 166 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 HIST2H2BDQ6DRA6 164 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 C5orf24Q7Z6I8 188 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 OR52L2PQ8NGH6 319 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 CT45A3Q8NHU0 189 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 FCGR1BQ92637 280 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 ST6GALNAC6Q969X2 333 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 STEAP1Q9UHE8 339 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 JPT1Q9UK76 154 aa16.06■□□□□ 0.16
NUP88-204ENST00000572290 SHISA3A0PJX4 238 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 SH2D7A6NKC9 451 aaPredicted RBP16.05■□□□□ 0.16
NUP88-204ENST00000572290 IGKV1D-33P01593 117 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 IGKV1-33P01594 117 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 AMY1AP04745 511 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 AMY2AP04746 511 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 LPLP06858 475 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 ZNF134P52741 427 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 HTD2P86397 168 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 HNF4GQ14541 408 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 HMGN3Q15651 99 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 MORN2Q502X0 79 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 STEAP3Q658P3 488 aa16.05■□□□□ 0.16
NUP88-204ENST00000572290 WIPF2Q8TF74 440 aaPredicted RBP16.05■□□□□ 0.16
NUP88-204ENST00000572290 RTN4IP1Q8WWV3 396 aaPredicted RBP16.05■□□□□ 0.16
NUP88-204ENST00000572290 KIAA2026Q5HYC2 2103 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 IGHV3-72A0A0B4J1Y9 119 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 NAPSAO96009 420 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 CD28P10747 220 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 VEGFCP49767 419 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 ZNF137PP52743 207 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 OR10A3P58181 314 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 GNMTQ14749 295 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 C9orf152Q5JTZ5 239 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 C22orf42Q6IC83 251 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 ZNF773Q6PK81 442 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 FAM110DQ8TAY7 271 aaPredicted RBP16.04■□□□□ 0.16
NUP88-204ENST00000572290 SETD6Q8TBK2 473 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 GALMQ96C23 342 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 RIMS4Q9H426 269 aaPredicted RBP16.04■□□□□ 0.16
NUP88-204ENST00000572290 ABRACLQ9P1F3 81 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 HSF4Q9ULV5 492 aa16.04■□□□□ 0.16
NUP88-204ENST00000572290 TMEM272A0A1B0GTI8 110 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 FOXI3A8MTJ6 420 aaPredicted RBP16.03■□□□□ 0.16
NUP88-204ENST00000572290 LDLRAD4O15165 306 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 TXNL1O43396 289 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 RGS11O94810 467 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 RAB3BP20337 219 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 PPP1CCP36873 323 aaKnown RBP16.03■□□□□ 0.16
NUP88-204ENST00000572290 TMEM50BP56557 158 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 EBI3Q14213 229 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 ZNF880Q6PDB4 577 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 MOB1BQ7L9L4 216 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 TGIF2LXQ8IUE1 241 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 IZUMO1Q8IYV9 350 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 LYG1Q8N1E2 194 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 OR56B1Q8NGI3 324 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 AK3Q9UIJ7 227 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 RAB22AQ9UL26 194 aa16.03■□□□□ 0.16
NUP88-204ENST00000572290 MGAM2Q2M2H8 2515 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 TRBV6-6A0A0A6YYG2 114 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 IFITM5A6NNB3 132 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 FGF16O43320 207 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 YPEL1O60688 119 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 CD1BP29016 333 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 LY6G6FQ5SQ64 297 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 Q6ZPA2 131 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 CENPVQ7Z7K6 275 aaPredicted RBP16.02■□□□□ 0.16
NUP88-204ENST00000572290 C5orf56Q8N8D9 126 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 ARHGAP5-AS1Q96IT6 56 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 EAF1Q96JC9 268 aaPredicted RBP16.02■□□□□ 0.16
NUP88-204ENST00000572290 YPEL2Q96QA6 119 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 ABHD14AQ9BUJ0 271 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 PECRQ9BY49 303 aa16.02■□□□□ 0.16
NUP88-204ENST00000572290 CMYA5Q8N3K9 4069 aa16.01■□□□□ 0.15
NUP88-204ENST00000572290 PLA2G7Q13093 441 aa16.01■□□□□ 0.15
NUP88-204ENST00000572290 NSUN5P1Q3KNT7 163 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms