RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 NCR3LG1Q68D85 454 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF525Q8N782 197 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 LHX4Q969G2 390 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 RCC1LQ96I51 464 aaKnown RBP9.18□□□□□ -0.94
CCDC40-207ENST00000572253 SMIM7Q9BQ49 75 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 MRPS18CQ9Y3D5 142 aaKnown RBP9.18□□□□□ -0.94
CCDC40-207ENST00000572253 TRBV24-1A0A075B6N3 115 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 A0A0G2JRQ6 117 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 CCL2P13500 99 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 ELLP55199 621 aaPredicted RBP9.18□□□□□ -0.94
CCDC40-207ENST00000572253 SRYQ05066 204 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 ADIRFQ15847 76 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 TRIM61Q5EBN2 209 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 PCSK4Q6UW60 755 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 PACRGQ96M98 296 aaPredicted RBP9.18□□□□□ -0.94
CCDC40-207ENST00000572253 FSCN3Q9NQT6 498 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 NAT8Q9UHE5 227 aa9.18□□□□□ -0.94
CCDC40-207ENST00000572253 LRRC3CA6NJW4 275 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 RNF212BA8MTL3 300 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 K7ESF4 209 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 PKIAP61925 76 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 OR10A7Q8NGE5 316 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 HS3ST6Q96QI5 342 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 PPP1R3CQ9UQK1 317 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 MPC1Q9Y5U8 109 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 KIAA1549Q9HCM3 1950 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 IFNA10P01566 189 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 LRRC75BQ2VPJ9 315 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 SPANXN5Q5MJ07 72 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 GFI1BQ5VTD9 330 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 CA5BP1Q8WTZ4 195 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 B4GALT7Q9UBV7 327 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 GVINP1Q7Z2Y8 2422 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 ATXN7O15265 892 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF737O75373 536 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 PSMB3P49720 205 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 IZUMO4Q1ZYL8 232 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 PI4KAP42356 2102 aa9.17□□□□□ -0.94
CCDC40-207ENST00000572253 XIRP2A4UGR9 3374 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 APLNRP35414 380 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 SLC38A11Q08AI6 406 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 TMEM241Q24JQ0 296 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 SSX9Q7RTT3 188 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 SNX22Q96L94 193 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 TMEM9BQ9NQ34 198 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 LY86O95711 162 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 WNT2P09544 360 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 PGA5P0DJD9 388 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 TUBG1P23258 451 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 PRR18Q8N4B5 295 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 ABHD5Q8WTS1 349 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF488Q96MN9 340 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 FGF23Q9GZV9 251 aaPredicted RBP9.16□□□□□ -0.94
CCDC40-207ENST00000572253 DLL3Q9NYJ7 618 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 TRAPPC2LQ9UL33 140 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 GAB2Q9UQC2 676 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 IGKV3D-15A0A087WSY6 115 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 H7BYZ3 331 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 GPX4P36969 197 aaPredicted RBP9.16□□□□□ -0.94
CCDC40-207ENST00000572253 CLN3Q13286 438 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 GAMTQ14353 236 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 MSMO1Q15800 293 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 MCEMP1Q8IX19 187 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 OR5P3Q8WZ94 311 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 APH1AQ96BI3 265 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 WDR61Q9GZS3 305 aaKnown RBP9.16□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF552Q9H707 407 aaPredicted RBP9.16□□□□□ -0.94
CCDC40-207ENST00000572253 VSIRQ9H7M9 311 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 OR14J1Q9UGF5 321 aa9.16□□□□□ -0.94
CCDC40-207ENST00000572253 UBE2L5PA0A1B0GUS4 154 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 CLDN1O95832 211 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 SSTP61278 116 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF880Q6PDB4 577 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 OR4C12Q96R67 309 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 PARD6GQ9BYG4 376 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-207ENST00000572253 SRD5A3Q9H8P0 318 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 PRSS50Q9UI38 385 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 TRAV24A0A0B4J272 114 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 FAM90A26D6RGX4 464 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 SLC23A3Q6PIS1 610 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 TAF15Q92804 592 aaKnown RBP eCLIP9.15□□□□□ -0.94
CCDC40-207ENST00000572253 PKIBQ9C010 78 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 PRDM13Q9H4Q3 707 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 OR1A1Q9P1Q5 309 aa9.15□□□□□ -0.94
CCDC40-207ENST00000572253 NPIPB11E5RHQ5 1161 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 PPP5D1E7EU14 171 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 J3QT63 122 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 WDR1O75083 606 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 MBP02144 154 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 ZNF726P1Q15940 193 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 BSXQ3C1V8 233 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 OR8G2PQ6IF36 304 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 Q6ZRM9 215 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 CYP2G1PQ6ZSU1 146 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 PPP1R32Q7Z5V6 425 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 GPR87Q9BY21 358 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 CRIM1Q9NZV1 1036 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 LAMP3Q9UQV4 416 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 TIMM9Q9Y5J7 89 aa9.15□□□□□ -0.95
CCDC40-207ENST00000572253 KIAA1324LA8MWY0 1029 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms