RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ING4Q9UNL4 249 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 A3GALT2U3KPV4 340 aa15.26■□□□□ 0.03
CCDC40-206ENST00000572083 TMEM212A6NML5 194 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 A8MZ25 164 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 GYG2O15488 501 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 SPINT2O43291 252 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 HSPA12AO43301 675 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 LANCL1O43813 399 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 CSTBP04080 98 aaKnown RBP15.25■□□□□ 0.03
CCDC40-206ENST00000572083 SOX2P48431 317 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 C5orf64Q2M2E5 130 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 C19orf54Q5BKX5 351 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 SYT6Q5T7P8 510 aaPredicted RBP15.25■□□□□ 0.03
CCDC40-206ENST00000572083 LHFPL3Q86UP9 236 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 CCDC197Q8NCU1 140 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 ALG8Q9BVK2 526 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 MRPL20Q9BYC9 149 aaKnown RBP15.25■□□□□ 0.03
CCDC40-206ENST00000572083 METTL9Q9H1A3 318 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 IMPAD1Q9NX62 359 aa15.25■□□□□ 0.03
CCDC40-206ENST00000572083 A0A1W2PP11 408 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 E9PI62 339 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 HBZP02008 142 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 ARSBP15848 533 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 HAGHQ16775 308 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 DNAL1Q4LDG9 190 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 LIN54Q6MZP7 749 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 LINC00596Q86U02 117 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 STX19Q8N4C7 294 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 OR4K15Q8NH41 348 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 IL36GQ9NZH8 169 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 KIAA1456Q9P272 454 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 TRAPPC2LQ9UL33 140 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 STUB1Q9UNE7 303 aa15.24■□□□□ 0.03
CCDC40-206ENST00000572083 FOXA2Q9Y261 457 aaPredicted RBP15.24■□□□□ 0.03
CCDC40-206ENST00000572083 IGLV1-51P01701 117 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 FASP25445 335 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 LRRC36Q1X8D7 754 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 MPV17LQ2QL34 196 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 ANKRD13BQ86YJ7 626 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 RGP1Q92546 391 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-206ENST00000572083 LGALS12Q96DT0 336 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 JAM3Q9BX67 310 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 CST11Q9H112 138 aa15.23■□□□□ 0.03
CCDC40-206ENST00000572083 HSPB1P04792 205 aaKnown RBP15.22■□□□□ 0.03
CCDC40-206ENST00000572083 IFNA6P05013 189 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 ADARB1P78563 741 aaKnown RBP15.22■□□□□ 0.03
CCDC40-206ENST00000572083 GNMTQ14749 295 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 TMEM30BQ3MIR4 351 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 DDI2Q5TDH0 399 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 MRPL48Q96GC5 212 aaKnown RBP15.22■□□□□ 0.03
CCDC40-206ENST00000572083 S100A13Q99584 98 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 NABP2Q9BQ15 211 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 ABHD14AQ9BUJ0 271 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 ELOVL1Q9BW60 279 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 RETNQ9HD89 108 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 RAB9BQ9NP90 201 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 AASSQ9UDR5 926 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 OAZ3Q9UMX2 235 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 ERGIC3Q9Y282 383 aa15.22■□□□□ 0.03
CCDC40-206ENST00000572083 EXOGQ9Y2C4 368 aaKnown RBP15.22■□□□□ 0.03
CCDC40-206ENST00000572083 RPSAP08865 295 aaKnown RBP15.21■□□□□ 0.03
CCDC40-206ENST00000572083 RCC1P18754 421 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-206ENST00000572083 ZNF93P35789 620 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-206ENST00000572083 SLC22A6Q4U2R8 563 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 C6orf183Q5T699 404 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 ODF3L1Q8IXM7 274 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 SYS1Q8N2H4 156 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 NPBQ8NG41 125 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 ABHD5Q8WTS1 349 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 TRUB1Q8WWH5 349 aaKnown RBP15.21■□□□□ 0.03
CCDC40-206ENST00000572083 FLYWCH2Q96CP2 140 aaKnown RBP15.21■□□□□ 0.03
CCDC40-206ENST00000572083 MS4A10Q96PG2 267 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 OR2S2Q9NQN1 319 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 ETAA1Q9NY74 926 aa15.21■□□□□ 0.03
CCDC40-206ENST00000572083 NDUFA3O95167 84 aa15.2■□□□□ 0.02
CCDC40-206ENST00000572083 CRIP2P52943 208 aaPredicted RBP15.2■□□□□ 0.02
CCDC40-206ENST00000572083 MORN2Q502X0 79 aa15.2■□□□□ 0.02
CCDC40-206ENST00000572083 STEAP3Q658P3 488 aa15.2■□□□□ 0.02
CCDC40-206ENST00000572083 C5orf24Q7Z6I8 188 aa15.2■□□□□ 0.02
CCDC40-206ENST00000572083 FBXL15Q9H469 300 aa15.2■□□□□ 0.02
CCDC40-206ENST00000572083 MCRIP1C9JLW8 97 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 ATP8B1O43520 1251 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 PPP1CCP36873 323 aaKnown RBP15.19■□□□□ 0.02
CCDC40-206ENST00000572083 OR3A3P47888 321 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-206ENST00000572083 TPPP2P59282 170 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 CX3CL1P78423 397 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 MEDAGQ5VYS4 303 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 TCTEX1D1Q8N7M0 179 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 OR52L2PQ8NGH6 319 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 SLC7A6OSQ96CW6 309 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-206ENST00000572083 ORAI1Q96D31 301 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 CYYR1Q96J86 154 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 FAM110AQ9BQ89 295 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 FAM103A1Q9BTL3 118 aaKnown RBP15.19■□□□□ 0.02
CCDC40-206ENST00000572083 PAK1IP1Q9NWT1 392 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-206ENST00000572083 RCC2Q9P258 522 aaKnown RBP15.19■□□□□ 0.02
CCDC40-206ENST00000572083 AP4S1Q9Y587 144 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 TNCP24821 2201 aa15.19■□□□□ 0.02
CCDC40-206ENST00000572083 SAC3D1A6NKF1 404 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms