RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 TFAP2CQ92754 450 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 ST6GALNAC6Q969X2 333 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
CIITA-207ENST00000571545 OR2S2Q9NQN1 319 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 MBNL3Q9NUK0 354 aaKnown RBP7.71□□□□□ -1.18
CIITA-207ENST00000571545 SCN3BQ9NY72 215 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 ABRACLQ9P1F3 81 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 ZNF580Q9UK33 172 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 TRAV39A0A0B4J263 110 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 A0A1W2PP11 408 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 A0A1W2PPE3 182 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 SH2D7A6NKC9 451 aaPredicted RBP7.7□□□□□ -1.18
CIITA-207ENST00000571545 ELANEP08246 267 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 VDAC1P21796 283 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 PSMA1P25786 263 aaKnown RBP7.7□□□□□ -1.18
CIITA-207ENST00000571545 SOX6P35712 828 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 THBS3P49746 956 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 GABPB1Q06547 395 aaPredicted RBP7.7□□□□□ -1.18
CIITA-207ENST00000571545 FOXE3Q13461 319 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 DIAPH2-AS1Q14236 149 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 TRAM1Q15629 374 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 PNLIPRP3Q17RR3 467 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 LY6G6FQ5SQ64 297 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 UTF1Q5T230 341 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 FAM71F2Q6NXP2 309 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 UNQ9370/PRO34162Q6UXP9 181 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 ZNF329Q86UD4 541 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 ZNF695Q8IW36 515 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 Q8N6K4 173 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 LINC00482Q8N8I6 264 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 TMEM104Q8NE00 496 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 OR8U1Q8NH10 309 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 OR4K15Q8NH41 348 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 KCNG3Q8TAE7 436 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 GALMQ96C23 342 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 ORAI1Q96D31 301 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 ABHD14AQ9BUJ0 271 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 TMEM59Q9BXS4 323 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 RIMS4Q9H426 269 aaPredicted RBP7.7□□□□□ -1.18
CIITA-207ENST00000571545 BANF2Q9H503 90 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 DCLRE1BQ9H816 532 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 TAF9BQ9HBM6 251 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 FKBP14Q9NWM8 211 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 ZNF581Q9P0T4 197 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 STEAP1Q9UHE8 339 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 MGAT4AQ9UM21 535 aa7.7□□□□□ -1.18
CIITA-207ENST00000571545 IGHV3-43A0A0B4J1X8 118 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 IGHV3-72A0A0B4J1Y9 119 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 A0A1W2PPK0 400 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 H0YHG0 523 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 YPEL1O60688 119 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 BPNT1O95861 308 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 MPIG6BO95866 241 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 PRB2P02812 416 aaPredicted RBP7.69□□□□□ -1.18
CIITA-207ENST00000571545 CDK1P06493 297 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 GNAO1P09471 354 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 IGHV3-43DP0DP04 118 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 EGFEM1PQ0D2K5 195 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 LSAMPQ13449 338 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 SPHARQ15513 63 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 MMDQ15546 238 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 ACSM3Q53FZ2 586 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 RBM48Q5RL73 367 aaKnown RBP7.69□□□□□ -1.18
CIITA-207ENST00000571545 C10orf99Q6UWK7 81 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 LYPD6Q86Y78 171 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 MRPL41Q8IXM3 137 aaKnown RBP7.69□□□□□ -1.18
CIITA-207ENST00000571545 FAM71E2Q8N5Q1 922 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 Q8N9W7 124 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 ZNF439Q8NDP4 499 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 OR2AK2Q8NG84 335 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 UFD1Q92890 307 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 NOL4LQ96MY1 436 aaPredicted RBP7.69□□□□□ -1.18
CIITA-207ENST00000571545 YPEL2Q96QA6 119 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 S1PR3Q99500 378 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 VCX3BQ9H321 246 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 GHITMQ9H3K2 345 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 TPRKBQ9Y3C4 175 aa7.69□□□□□ -1.18
CIITA-207ENST00000571545 UBE2QL1A1L167 161 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 ARL6IP5O75915 188 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 IGF1P05019 195 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 RCC1P18754 421 aaPredicted RBP7.68□□□□□ -1.18
CIITA-207ENST00000571545 HTR2CP28335 458 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 CDX1P47902 265 aaPredicted RBP7.68□□□□□ -1.18
CIITA-207ENST00000571545 RPS27AP62979 156 aaKnown RBP7.68□□□□□ -1.18
CIITA-207ENST00000571545 MORN2Q502X0 79 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 HSD17B12Q53GQ0 312 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 CT45A1Q5HYN5 189 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 NKAPLQ5M9Q1 402 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 C1orf100Q5SVJ3 147 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 C8orf86Q6ZUL3 223 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 OR10V1Q8NGI7 309 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 OR6M1Q8NGM8 313 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 OR1L1Q8NH94 360 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 CT45A3Q8NHU0 189 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 UBALD1Q8TB05 177 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 FAM46BQ96A09 425 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 ZNF251Q9BRH9 671 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 URM1Q9BTM9 101 aaKnown RBP7.68□□□□□ -1.18
CIITA-207ENST00000571545 TMED9Q9BVK6 235 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 CHMP1AQ9HD42 196 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms