RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 GHRLQ9UBU3 117 aa9.81□□□□□ -0.84
CTDNEP1-205ENST00000570828 IGHV3-72A0A0B4J1Y9 119 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 SERPINE3A8MV23 424 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 PTGES3LE9PB15 166 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 PDCD6O75340 191 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 PRB2P02812 416 aaPredicted RBP9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 GLAP06280 429 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 CDK1P06493 297 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 UBBP0CG47 229 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 FUT3P21217 361 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 LOXL3P58215 753 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 RNLSQ5VYX0 342 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 FOXRED2Q8IWF2 684 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 IZUMO1Q8IYV9 350 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 MS4A15Q8N5U1 240 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 OR10V1Q8NGI7 309 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 CHPT1Q8WUD6 406 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 RTN4IP1Q8WWV3 396 aaPredicted RBP9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 PHF21AQ96BD5 680 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 TMED9Q9BVK6 235 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 NECAP2Q9NVZ3 263 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 SCN3BQ9NY72 215 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
CTDNEP1-205ENST00000570828 NCBP2LA6PVI3 153 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 TXNL1O43396 289 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 SC5DO75845 299 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 MPIG6BO95866 241 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 HBZP02008 142 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 VHLP40337 213 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 SLC35A2P78381 396 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 SLC35B1P78383 322 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 INSL4Q14641 139 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 SPHARQ15513 63 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 ACSM3Q53FZ2 586 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 RBM48Q5RL73 367 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 C6orf141Q5SZD1 244 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 GLT8D1Q68CQ7 371 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 SLC25A48Q6ZT89 311 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 SLC35E3Q7Z769 313 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 ZNF329Q86UD4 541 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 TGIF2LXQ8IUE1 241 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 GAPTQ8N292 157 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 OR2T10Q8NGZ9 312 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 OR1L1Q8NH94 360 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 PHYHIPQ92561 330 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 NOL4LQ96MY1 436 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 KCNIP1Q9NZI2 227 aa9.79□□□□□ -0.84
CTDNEP1-205ENST00000570828 UBE2QL1A1L167 161 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 H0YHG0 523 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 SLC31A2O15432 143 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 IGLL1P15814 213 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 RCC1P18754 421 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 CD1BP29016 333 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 AQP4P55087 323 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 EBI3Q14213 229 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 MED22Q15528 200 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 HSD17B12Q53GQ0 312 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 FAM27D1Q5T7N8 215 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 SIGIRRQ6IA17 410 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 FAM53AQ6NSI3 398 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 ZNF439Q8NDP4 499 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 OR51D1Q8NGF3 324 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 ST6GALNAC6Q969X2 333 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 NEDD4LQ96PU5 975 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 TAF9BQ9HBM6 251 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 OR2S2Q9NQN1 319 aa9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 LIN7CQ9NUP9 197 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-205ENST00000570828 NUDT19A8MXV4 375 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 AP4M1O00189 453 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 MOSP00540 346 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 IGHG2P01859 326 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 ZNF137PP52743 207 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 RPL23AP62750 156 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 CT45A1Q5HYN5 189 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 STEAP3Q658P3 488 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 UNQ9370/PRO34162Q6UXP9 181 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 Q6ZPA2 131 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 CEACAM19Q7Z692 300 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 ZNF554Q86TJ5 538 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 LRRTM1Q86UE6 522 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 COMMD1Q8N668 190 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 Q8N6K4 173 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 CT45A3Q8NHU0 189 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 MRAPQ8TCY5 172 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 UFD1Q92890 307 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 TMEM59Q9BXS4 323 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 MBNL3Q9NUK0 354 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 AURKAIP1Q9NWT8 199 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 NKX1-2Q9UD57 310 aaPredicted RBP9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 LINC00527Q9UJ94 153 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 JPT1Q9UK76 154 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 LSM2Q9Y333 95 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 TPRKBQ9Y3C4 175 aa9.77□□□□□ -0.85
CTDNEP1-205ENST00000570828 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 DUS4LO95620 317 aaKnown RBP9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 CHATP28329 748 aa9.76□□□□□ -0.85
CTDNEP1-205ENST00000570828 GPR12P47775 334 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms