RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PCBP3P57721 371 aaKnown RBP5.69□□□□□ -1.5
SMG1-217ENST00000569764 EXOSC7Q15024 291 aaKnown RBP5.69□□□□□ -1.5
SMG1-217ENST00000569764 TGIF2LYQ8IUE0 185 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 OR10R2Q8NGX6 335 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 RGP1Q92546 391 aaPredicted RBP5.69□□□□□ -1.5
SMG1-217ENST00000569764 RDH12Q96NR8 316 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 CBLN4Q9NTU7 201 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 TESQ9UGI8 421 aaKnown RBP5.69□□□□□ -1.5
SMG1-217ENST00000569764 COA3Q9Y2R0 106 aaPredicted RBP5.69□□□□□ -1.5
SMG1-217ENST00000569764 EXOSC1Q9Y3B2 195 aaKnown RBP5.69□□□□□ -1.5
SMG1-217ENST00000569764 CHST2Q9Y4C5 530 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 V9GYS6 101 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 A0A0G2JK05 382 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 AIPO00170 330 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 ZNF205O95201 554 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 CDAP32320 146 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 ISL1P61371 349 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 LSM3P62310 102 aaKnown RBP5.69□□□□□ -1.5
SMG1-217ENST00000569764 SLC35B1P78383 322 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 PSG4Q00888 419 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 CLEC12BQ2HXU8 276 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 PYY3Q5JQD4 70 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 COL5A1-AS1Q5SY13 56 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 WDR31Q8NA23 367 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 HAVCR2Q8TDQ0 301 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 MBD3L1Q8WWY6 194 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 WSB1Q9Y6I7 421 aa5.69□□□□□ -1.5
SMG1-217ENST00000569764 IRGMA1A4Y4 181 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 TMEM200CA6NKL6 621 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 LMX1BO60663 402 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 PSMB1P20618 241 aaKnown RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 IL3RAP26951 378 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 PPOXP50336 477 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 GGTLC2Q14390 218 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 OR7A5Q15622 319 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 XAF1Q6GPH4 301 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 FRRS1Q6ZNA5 592 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 CDC20BQ86Y33 519 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 STPG2Q8N412 459 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 SMAP2Q8WU79 429 aaPredicted RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 CTHRC1Q96CG8 243 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 OXGR1Q96P68 337 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 MARVELD1Q9BSK0 173 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 NXF2Q9GZY0 626 aaKnown RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 TMEM14AQ9Y6G1 99 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 ZNF724A8MTY0 619 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 CLDN34H7C241 214 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 M0R2Z0 102 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 FGF16O43320 207 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 TIAF1O95411 115 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 REG1AP05451 166 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 LIMS3P0CW19 117 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 LIMS4P0CW20 117 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 GLI4P10075 376 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 NTF4P34130 210 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 ZNF133P52736 654 aaPredicted RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 TAS2R31P59538 309 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 GNB2P62879 340 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 MFGE8Q08431 387 aaPredicted RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 ZNF585BQ52M93 769 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 ADGRE4PQ86SQ3 457 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 MDS2Q8NDY4 140 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 OR10D3Q8NH80 312 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 DIRAS2Q96HU8 199 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 MCHR1Q99705 422 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 FAAP24Q9BTP7 215 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 SYT4Q9H2B2 425 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 OR51I2Q9H344 312 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 PCNX3Q9H6A9 2034 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 DAPL1A0PJW8 107 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 CLDN24A6NM45 220 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 DEGS1O15121 323 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 EMX1Q04741 257 aaPredicted RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 PHLDA2Q53GA4 152 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 SYT14P1Q58G82 188 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 KDM4DQ6B0I6 523 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 KCTD18Q6PI47 426 aaPredicted RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 SLC36A1Q7Z2H8 476 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 ZNF439Q8NDP4 499 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 OR8G5Q8NG78 346 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 OR1F12Q8NHA8 337 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 ARL11Q969Q4 196 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 RPEQ96AT9 228 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 ZNF681Q96N22 645 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 NAA38Q9BRA0 125 aaKnown RBP5.68□□□□□ -1.5
SMG1-217ENST00000569764 JPT1Q9UK76 154 aa5.68□□□□□ -1.5
SMG1-217ENST00000569764 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 A0A1W2PRF3 423 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 A0A1W2PRM7 423 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 TRAPPC13A5PLN9 417 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 CCL3P10147 92 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 IER3P46695 156 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 SELENOWP63302 87 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 ALG10BQ5I7T1 473 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 PRR31Q5SQ13 230 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 OR2T5Q6IEZ7 315 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 DGAT2L6Q6ZPD8 337 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 DTX2Q86UW9 622 aa5.67□□□□□ -1.5
SMG1-217ENST00000569764 ADAD2Q8NCV1 583 aaKnown RBP5.67□□□□□ -1.5
SMG1-217ENST00000569764 OR2T29Q8NH02 315 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms