RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 PRSS37A4D1T9 235 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 OR5H1A6NKK0 313 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 CDC40O60508 579 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBR1-208ENST00000569066 RDH16O75452 317 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 IFNW1P05000 195 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 APODP05090 189 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 BPGMP07738 259 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 FABP4P15090 132 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 UGT2B7P16662 529 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 GNRHRP30968 328 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 GGT2P36268 569 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 P2RY2P41231 377 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 RANP62826 216 aaKnown RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 ARHGAP11BQ3KRB8 267 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 AKR1C8PQ5T2L2 129 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 ZNF660Q6AZW8 331 aaPredicted RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 CMC1Q7Z7K0 106 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 CALHM1Q8IU99 346 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 SLC34A3Q8N130 599 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 FAM58AQ8N1B3 248 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 ZNF433Q8N7K0 673 aaPredicted RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 OR10G9Q8NGN4 311 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 OR5K2Q8NHB8 316 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 OR52E6Q96RD3 313 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 TBX5Q99593 518 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 MED10Q9BTT4 135 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 OR2J1Q9GZK6 312 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 DHX35Q9H5Z1 703 aaKnown RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 WDR54Q9H977 334 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 PLEKHJ1Q9NW61 149 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 RPS6KB2Q9UBS0 482 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 ZNF629Q9UEG4 869 aaPredicted RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 OTOFQ9HC10 1997 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 PHIPQ8WWQ0 1821 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 PPLO60437 1756 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 KIAA0556O60303 1618 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 PREX2Q70Z35 1606 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 MEIKINA0A087WXM9 373 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 A0A0B4J2A0 478 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 C7orf66A4D0T2 115 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 C11orf94C9JXX5 98 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 TPST1O60507 370 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 CD37P11049 281 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 SCGB1A1P11684 91 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 CRISP2P16562 243 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 GGT1P19440 569 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 KDELR1P24390 212 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 GABRR2P28476 465 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 ADORA1P30542 326 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 SDC4P31431 198 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 TTPAP49638 278 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 CKS1BP61024 79 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 RPS15AP62244 130 aaKnown RBP3.85□□□□□ -1.79
UBR1-208ENST00000569066 FAM3AP98173 230 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 AESQ08117 197 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 TAF9Q16594 264 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 TMPRSS11AQ6ZMR5 421 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 ZCCHC23Q6ZST2 131 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 TCF24Q7RTU0 167 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 UBALD2Q8IYN6 164 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 ACBD7Q8N6N7 88 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 OR51L1Q8NGJ5 315 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 OR51G1Q8NGK1 321 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 OR2T35Q8NGX2 323 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 CASTOR1Q8WTX7 329 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 TMEM159Q96B96 161 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 ACOT13Q9NPJ3 140 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 ZNF226Q9NYT6 803 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 ADA2Q9NZK5 511 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 CALML5Q9NZT1 146 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 SHPKQ9UHJ6 478 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 SLC22A13Q9Y226 551 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 MTCH2Q9Y6C9 303 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 ROBO3Q96MS0 1386 aa3.85□□□□□ -1.79
UBR1-208ENST00000569066 TMEM269A0A1B0GVZ9 245 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 PLAC8L1A1L4L8 177 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 PRORSD1PA6NEY8 169 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 KLLNB2CW77 178 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 CORTO00230 105 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 BHLHE40O14503 412 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 LYRM1O43325 122 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 FADS2O95864 444 aaKnown RBP3.84□□□□□ -1.79
UBR1-208ENST00000569066 CXCL5P42830 114 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 NMUP48645 174 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 MARCKSL1P49006 195 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 CYB561P49447 251 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 TAS2R41P59536 307 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 HMGCS1Q01581 520 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 C18orf21Q32NC0 220 aaPredicted RBP3.84□□□□□ -1.79
UBR1-208ENST00000569066 COX19Q49B96 90 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 TFDP3Q5H9I0 405 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 COL5A1-AS1Q5SY13 56 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 BCL2L15Q5TBC7 163 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 N4BP2L1Q5TBK1 243 aaPredicted RBP3.84□□□□□ -1.79
UBR1-208ENST00000569066 SMIM20Q8N5G0 67 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 ISOC2Q96AB3 205 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 REEP6Q96HR9 211 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 NUDT9Q9BW91 350 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 TMEM9BQ9NQ34 198 aa3.84□□□□□ -1.79
UBR1-208ENST00000569066 OR2S2Q9NQN1 319 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms