RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ERVK13-1Q9NX77 482 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
HERPUD1-215ENST00000568676 A8MZ25 164 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 C12orf77C9JDV5 145 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 G3V318 75 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 SLC31A2O15432 143 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 ALPLP05186 524 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 SERPINA2P20848 420 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 ZNF134P52741 427 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 ACTBP60709 375 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 SYT6Q5T7P8 510 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 DDI2Q5TDH0 399 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 C1orf146Q5VVC0 180 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 LYPD6Q86Y78 171 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 GAPTQ8N292 157 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 PARP11Q9NR21 331 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 ZNF581Q9P0T4 197 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 RCC2Q9P258 522 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
HERPUD1-215ENST00000568676 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 E9PI62 339 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 NBR2O15453 112 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 HBZP02008 142 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 LGALS1P09382 135 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 BDKRB2P30411 391 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 SOX2P48431 317 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 C5orf64Q2M2E5 130 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 PYHIN1Q6K0P9 492 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 NPBQ8NG41 125 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 UBALD1Q8TB05 177 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 FLYWCH2Q96CP2 140 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 OR5B12Q96R08 314 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 OR4C12Q96R67 309 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 TOLLIPQ9H0E2 274 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 ETAA1Q9NY74 926 aa12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 NKX1-2Q9UD57 310 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-215ENST00000568676 FAM90A7PA6NKC0 464 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 SAC3D1A6NKF1 404 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 FAM90A23PA8MXZ1 464 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 GLAP06280 429 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 VEGFCP49767 419 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 PITPNAQ00169 270 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 SLC22A6Q4U2R8 563 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 MORN2Q502X0 79 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 LY6G6FQ5SQ64 297 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 ZNF660Q6AZW8 331 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 RPL22L1Q6P5R6 122 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 OR10V1Q8NGI7 309 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 ABHD14AQ9BUJ0 271 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 ANKRD60Q9BZ19 345 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 OR2S2Q9NQN1 319 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 RNF150Q9ULK6 438 aa12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 FOXA2Q9Y261 457 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-215ENST00000568676 SACSQ9NZJ4 4579 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 MAGEA13PA6NCF6 341 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 HSPA12AO43301 675 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 SC5DO75845 299 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 RGS11O94810 467 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 NDUFA3O95167 84 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 BLVRBP30043 206 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 RIPK1Q13546 671 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 FAM53AQ6NSI3 398 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 RGP1Q92546 391 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 TPSG1Q9NRR2 321 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 KCNIP1Q9NZI2 227 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 CKLFQ9UBR5 152 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 RPL36Q9Y3U8 105 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
HERPUD1-215ENST00000568676 A0A1W2PN81 502 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 TRIM64CA6NLI5 447 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 EBAG9O00559 213 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 GABRB1P18505 474 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 CD40LGP29965 261 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 CHRNA7P36544 502 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 ALDH3A2P51648 485 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 SLURP1P55000 103 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 HTD2P86397 168 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 RAB12Q6IQ22 244 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 FAM71F2Q6NXP2 309 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 OR4K15Q8NH41 348 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 ARPC1AQ92747 370 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 ZNF184Q99676 751 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 TAF9BQ9HBM6 251 aa12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 MBNL3Q9NUK0 354 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-215ENST00000568676 STUB1Q9UNE7 303 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms