RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 CENPOQ9BU64 300 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 PECRQ9BY49 303 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 OR2S2Q9NQN1 319 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 AK3Q9UIJ7 227 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 ETV7Q9Y603 341 aa10.48□□□□□ -0.73
CLK3-224ENST00000568605 TRBV6-6A0A0A6YYG2 114 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 CLPSL1A2RUU4 121 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 FOXI3A8MTJ6 420 aaPredicted RBP10.47□□□□□ -0.73
CLK3-224ENST00000568605 SERPINE3A8MV23 424 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 HSD17B6O14756 317 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 IGHV3-7P01780 117 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 SLC2A2P11168 524 aaPredicted RBP10.47□□□□□ -0.73
CLK3-224ENST00000568605 LOXL3P58215 753 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 HLA-DRB3P79483 266 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 HTD2P86397 168 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 OLFML2AQ68BL7 652 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 NR2C2APQ86WQ0 139 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 OR1L1Q8NH94 360 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 LGALS14Q8TCE9 139 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 YIPF6Q96EC8 236 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 MRPS26Q9BYN8 205 aaKnown RBP10.47□□□□□ -0.73
CLK3-224ENST00000568605 ATG5Q9H1Y0 275 aa10.47□□□□□ -0.73
CLK3-224ENST00000568605 A6NDX4 124 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 LY6LH3BQJ8 138 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 TSPAN9O75954 239 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 HIST1H1DP16402 221 aaKnown RBP10.46□□□□□ -0.73
CLK3-224ENST00000568605 TMEM50BP56557 158 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 RELBQ01201 579 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 ZNF816Q0VGE8 651 aaPredicted RBP10.46□□□□□ -0.73
CLK3-224ENST00000568605 IDNKQ5T6J7 187 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 ZNF880Q6PDB4 577 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 C11orf88Q6PI97 169 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 Q6ZSV7 163 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 OR2AK2Q8NG84 335 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 OR10V1Q8NGI7 309 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 OR2T6Q8NHC8 308 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 IL1F10Q8WWZ1 152 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 ABHD14AQ9BUJ0 271 aa10.46□□□□□ -0.73
CLK3-224ENST00000568605 A0A075B6Q4 140 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 A0A0B4J203 849 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 A0A1W2PPE3 182 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 RAB27BO00194 218 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 MFNGO00587 321 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 HSPA12AO43301 675 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 CHST1O43916 411 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 YPEL1O60688 119 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 GAPDHP04406 335 aaKnown RBP10.45□□□□□ -0.74
CLK3-224ENST00000568605 FAM106CPP0CH98 169 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 TALDO1P37837 337 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 KIR2DS4P43632 304 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 RAB13P51153 203 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 EFNB2P52799 333 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 ARFRP1Q13795 201 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 KIR2DS1Q14954 304 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 ARSJQ5FYB0 599 aaPredicted RBP10.45□□□□□ -0.74
CLK3-224ENST00000568605 PLAC9Q5JTB6 97 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 LY6G6FQ5SQ64 297 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 SHISA2Q6UWI4 295 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 SLC25A48Q6ZT89 311 aaKnown RBP10.45□□□□□ -0.74
CLK3-224ENST00000568605 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 ZNF439Q8NDP4 499 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 PIFOQ8TCI5 191 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 WFDC12Q8WWY7 111 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 EDARADDQ8WWZ3 215 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 YPEL2Q96QA6 119 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 ZNF747Q9BV97 191 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 C16orf95Q9H693 158 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 RNF167Q9H6Y7 350 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 RHBDL2Q9NX52 303 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 RNF114Q9Y508 228 aa10.45□□□□□ -0.74
CLK3-224ENST00000568605 A0A1W2PPI3 338 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 M0QZK8 103 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 SMIM18P0DKX4 95 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 SNRPBP14678 240 aaKnown RBP10.44□□□□□ -0.74
CLK3-224ENST00000568605 ZNF137PP52743 207 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 PLA2G7Q13093 441 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 MOGAT2Q3SYC2 334 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 MORN2Q502X0 79 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 UTF1Q5T230 341 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 TGIF2LXQ8IUE1 241 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 LYG1Q8N1E2 194 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 OR13F1Q8NGS4 319 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 OR56B4Q8NH76 319 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 LINC01006Q8NI28 216 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 HDHD3Q9BSH5 251 aaPredicted RBP10.44□□□□□ -0.74
CLK3-224ENST00000568605 SLC25A33Q9BSK2 321 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 FUNDC2Q9BWH2 189 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 PRSS22Q9GZN4 317 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 Q9N2K0 584 aa10.44□□□□□ -0.74
CLK3-224ENST00000568605 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.44□□□□□ -0.744e-6■■■□□ 18.6
CLK3-224ENST00000568605 A0A0A6YYH2 397 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 IGHV1-3A0A0C4DH29 117 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 A6NJ64 397 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 TIMM23O14925 209 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 OR2F2O95006 317 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 FCGR3AP08637 254 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 GSTP1P09211 210 aaKnown RBP10.43□□□□□ -0.74
CLK3-224ENST00000568605 CLEC2LP0C7M8 214 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 GNB3P16520 340 aa10.43□□□□□ -0.74
CLK3-224ENST00000568605 ZBTB25P24278 435 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms