RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NUFIP2Q7Z417 695 aaKnown RBP9.42□□□□□ -0.9
PALB2-206ENST00000568219 OR51G1Q8NGK1 321 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 RFESDQ8TAC1 157 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 CPT1CQ8TCG5 803 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 GATAD1Q8WUU5 269 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 CLN8Q9UBY8 286 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 PPIAL4AQ9Y536 164 aa9.42□□□□□ -0.9
PALB2-206ENST00000568219 C17orf112F2Z3M2 114 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 M0QZK8 103 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 GGCTO75223 188 aaKnown RBP9.41□□□□□ -0.9
PALB2-206ENST00000568219 MRPL33O75394 65 aaKnown RBP9.41□□□□□ -0.9
PALB2-206ENST00000568219 DRD1P21728 446 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 CBLN1P23435 193 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 RTL10Q7L3V2 364 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 OR5R1Q8NH85 324 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 MSI2Q96DH6 328 aaKnown RBP9.41□□□□□ -0.9
PALB2-206ENST00000568219 TECTBQ96PL2 329 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 LIME1Q9H400 295 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 ENY2Q9NPA8 101 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 PLXNB3Q9ULL4 1909 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 NOTCH4Q99466 2003 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 A0A1W2PQD3 144 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 ZNF253O75346 499 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 P04436 131 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 LYL1P12980 280 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 BCL3P20749 454 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 FNDC7Q5VTL7 733 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 TEX38Q6PEX7 206 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 SYT13Q7L8C5 426 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 H2BFWTQ7Z2G1 175 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 ZDHHC23Q8IYP9 409 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 D2HGDHQ8N465 521 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 OR2V1Q8NHB1 315 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 ZNF596Q8TC21 504 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 ZNF837Q96EG3 531 aaPredicted RBP9.41□□□□□ -0.9
PALB2-206ENST00000568219 RPH3ALQ9UNE2 315 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 ZNF814B7Z6K7 855 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 ZNF552Q9H707 407 aaPredicted RBP9.41□□□□□ -0.9
PALB2-206ENST00000568219 SEMA5BQ9P283 1151 aa9.41□□□□□ -0.9
PALB2-206ENST00000568219 A6NCN8 305 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 IRF2P14316 349 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 ARL2-SNX15V9GYD0 113 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 ANAPC1Q9H1A4 1944 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 NXPH2O95156 264 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 CTXN2P0C2S0 81 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 CEACAM6P40199 344 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 GNB2P62879 340 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 TMPRSS7Q7RTY8 843 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 WDFY1Q8IWB7 410 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 ACY3Q96HD9 319 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 CISD1Q9NZ45 108 aaKnown RBP9.4□□□□□ -0.9
PALB2-206ENST00000568219 PLCE1Q9P212 2302 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 DEFB108AA8MXU0 73 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 E9PLN8 166 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 TRAF3IP2O43734 574 aaPredicted RBP9.4□□□□□ -0.9
PALB2-206ENST00000568219 APOA2P02652 100 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 IGKV3-11P04433 115 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 F2RP25116 425 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 CHRNB4P30926 498 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 CDC34P49427 236 aaPredicted RBP9.4□□□□□ -0.9
PALB2-206ENST00000568219 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
PALB2-206ENST00000568219 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 GABRA2P47869 451 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 RAB7AP51149 207 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 PCBD1P61457 104 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 MRPL54Q6P161 138 aaKnown RBP9.39□□□□□ -0.91
PALB2-206ENST00000568219 LYZL4Q96KX0 146 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 WNT10AQ9GZT5 417 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 FSCN3Q9NQT6 498 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 MTCH2Q9Y6C9 303 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 BCAT2O15382 392 aaPredicted RBP9.39□□□□□ -0.91
PALB2-206ENST00000568219 DLEU1O43261 78 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 NPIPB7O75200 414 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 HSBP1O75506 76 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 SYNGR4O95473 234 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 GCH1P30793 250 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 HOXA6P31267 233 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 GALNSP34059 522 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
PALB2-206ENST00000568219 EDDM3AQ14507 147 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 TMEM240Q5SV17 173 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 PRR27Q6MZM9 219 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 OR10G8Q8NGN5 311 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 NUDT16L1Q9BRJ7 211 aaKnown RBP9.39□□□□□ -0.91
PALB2-206ENST00000568219 FER1L5A0AVI2 2057 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 IGKV1D-13A0A0B4J2D9 117 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 FAM157AC9JC47 383 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 IGKV1-13P0DP09 117 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 GDF1P27539 372 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 G6PCP35575 357 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
PALB2-206ENST00000568219 SSMEM1Q8WWF3 244 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 TAF15Q92804 592 aaKnown RBP eCLIP9.39□□□□□ -0.91
PALB2-206ENST00000568219 APH1AQ96BI3 265 aa9.39□□□□□ -0.91
PALB2-206ENST00000568219 FOXB1Q99853 325 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms