RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ACER2Q5QJU3 275 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 C10orf91Q5T1B1 145 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 CTRB2Q6GPI1 263 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 LCN10Q6JVE6 187 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 LGI3Q8N145 548 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 OSR2Q8N2R0 312 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 UBAC2Q8NBM4 344 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 LFNGQ8NES3 379 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 Q8NFD4 153 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 FBXO17Q96EF6 278 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 ADGRG7Q96K78 797 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 SMIM8Q96KF7 97 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 LYZL4Q96KX0 146 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 JSRP1Q96MG2 331 aaPredicted RBP4.48□□□□□ -1.69
CAPN3-217ENST00000567817 TSNAXQ99598 290 aaKnown RBP4.48□□□□□ -1.69
CAPN3-217ENST00000567817 FAM173AQ9BQD7 235 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF2Q9BSG1 426 aaPredicted RBP4.48□□□□□ -1.69
CAPN3-217ENST00000567817 RNF126Q9BV68 326 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 C1QTNF5Q9BXJ0 243 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 OR2H1Q9GZK4 316 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 SLC5A7Q9GZV3 580 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 NAA60Q9H7X0 242 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 FN3KRPQ9HA64 309 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 CRLF2Q9HC73 371 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 FAM212BQ9NTI7 297 aaPredicted RBP4.48□□□□□ -1.69
CAPN3-217ENST00000567817 ASF1BQ9NVP2 202 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 NDRG3Q9UGV2 375 aa4.48□□□□□ -1.69
CAPN3-217ENST00000567817 MCTS1Q9ULC4 181 aaKnown RBP4.48□□□□□ -1.69
CAPN3-217ENST00000567817 FN1P02751 2386 aaKnown RBP4.48□□□□□ -1.69
CAPN3-217ENST00000567817 A0A1W2PP11 408 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 OR5H15A6NDH6 313 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF850A8MQ14 1090 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF705EA8MWA4 302 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 KRTAP29-1A8MX34 341 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 TSPAN4O14817 238 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 DEDDO75618 318 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SYNGR4O95473 234 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 DIRAS3O95661 229 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 CDS2O95674 445 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 CRYABP02511 175 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 OPN1LWP04000 364 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 TK1P04183 234 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 HEXAP06865 529 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 FCGR3AP08637 254 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SEC11BP0C7V7 166 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF728P0DKX0 622 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 MMP9P14780 707 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF32P17041 273 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 FUT3P21217 361 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 GABRR1P24046 479 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 GDF1P27539 372 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 CHATP28329 748 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ARR3P36575 388 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 P2RY1P47900 373 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SULT1A2P50226 295 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 PIGPP57054 158 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 FOXL2P58012 376 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 HERV-K104P61576 105 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 RND3P61587 244 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 PSG4Q00888 419 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 DEFA5Q01523 94 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 FOXO1Q12778 655 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 PDZK1IP1Q13113 114 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 BTN1A1Q13410 526 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF266Q14584 549 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 GNMTQ14749 295 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ATXN7L3Q14CW9 347 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 RNPS1Q15287 305 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SLC9A3R2Q15599 337 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 RSPO1Q2MKA7 263 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 IAH1Q2TAA2 248 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SNAI3Q3KNW1 292 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ANKRD55Q3KP44 614 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 PHYHD1Q5SRE7 291 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 C9orf47Q6ZRZ4 202 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 TGIF2LYQ8IUE0 185 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SKA3Q8IX90 412 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 RBMXL3Q8N7X1 1067 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 RELL2Q8NC24 303 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 OR8G5Q8NG78 346 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 OR5D18Q8NGL1 313 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 OR10D3Q8NH80 312 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 PCNPQ8WW12 178 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 RTN4IP1Q8WWV3 396 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 APOBEC3DQ96AK3 386 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 MOB3AQ96BX8 217 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 MSI2Q96DH6 328 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 NARS2Q96I59 477 aaKnown RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF75AQ96N20 296 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SPACA5Q96QH8 159 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 NKX3-1Q99801 234 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 SRXN1Q9BYN0 137 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 NKX6-2Q9C056 277 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-217ENST00000567817 CXXC4Q9H2H0 198 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 TAF9BQ9HBM6 251 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 CYTL1Q9NRR1 136 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 GPR173Q9NS66 373 aa4.47□□□□□ -1.69
CAPN3-217ENST00000567817 ZNF629Q9UEG4 869 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms