RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 FAM27D1Q5T7N8 215 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 STEAP3Q658P3 488 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 GLT8D1Q68CQ7 371 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 SIGIRRQ6IA17 410 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 SLC25A48Q6ZT89 311 aaKnown RBP3.8□□□□□ -1.8
CLK3-219ENST00000567805 REC114Q7Z4M0 266 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 MOB3BQ86TA1 216 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 LRRTM1Q86UE6 522 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 IZUMO1Q8IYV9 350 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 PRR18Q8N4B5 295 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 C5orf56Q8N8D9 126 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 TMEM104Q8NE00 496 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 RTN4IP1Q8WWV3 396 aaPredicted RBP3.8□□□□□ -1.8
CLK3-219ENST00000567805 UFD1Q92890 307 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 ST6GALNAC6Q969X2 333 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 FAM46BQ96A09 425 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 TMED9Q9BVK6 235 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 ANKRD60Q9BZ19 345 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 VCX3BQ9H321 246 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 BANF2Q9H503 90 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 MBNL3Q9NUK0 354 aaKnown RBP3.8□□□□□ -1.8
CLK3-219ENST00000567805 GNG12Q9UBI6 72 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 TPRKBQ9Y3C4 175 aa3.8□□□□□ -1.8
CLK3-219ENST00000567805 IGHV3-43A0A0B4J1X8 118 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 SCO2A0A1W2PP80 73 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 A0A1W2PRX2 142 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 UBE2QL1A1L167 161 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 PSMB11A5LHX3 300 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 SH2D7A6NKC9 451 aaPredicted RBP3.79□□□□□ -1.8
CLK3-219ENST00000567805 NCBP2LA6PVI3 153 aaKnown RBP3.79□□□□□ -1.8
CLK3-219ENST00000567805 SLC22A1O15245 554 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 RGS10O43665 173 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 BPNT1O95861 308 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 MPIG6BO95866 241 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 MOSP00540 346 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 GHRHP01286 108 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 IGHG2P01859 326 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 UCHL1P09936 223 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 IGHV3-43DP0DP04 118 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 CD37P11049 281 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 RCC1P18754 421 aaPredicted RBP3.79□□□□□ -1.8
CLK3-219ENST00000567805 SRMP19623 302 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 PSMA1P25786 263 aaKnown RBP3.79□□□□□ -1.8
CLK3-219ENST00000567805 CHATP28329 748 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 HTR2CP28335 458 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 CD1BP29016 333 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 SLC6A1P30531 599 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 VHLP40337 213 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 RANBP1P43487 201 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 REG1BP48304 166 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 HSPA13P48723 471 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 RPS27AP62979 156 aaKnown RBP3.79□□□□□ -1.8
CLK3-219ENST00000567805 SLC35B1P78383 322 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 HTD2P86397 168 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 TPBGQ13641 420 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 HNF4GQ14541 408 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 INSL4Q14641 139 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 IRF3Q14653 427 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 MORN2Q502X0 79 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 HSD17B12Q53GQ0 312 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 LY6G6FQ5SQ64 297 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 C1orf100Q5SVJ3 147 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 LIPKQ5VXJ0 399 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 PRSS48Q7RTY5 328 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 CEACAM19Q7Z692 300 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 SLC35E3Q7Z769 313 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 TGIF2LXQ8IUE1 241 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 FOXRED2Q8IWF2 684 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 Q8N6K4 173 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 ZNF439Q8NDP4 499 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 WFDC9Q8NEX5 89 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 OR8H1Q8NGG4 311 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 OR6M1Q8NGM8 313 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 OR2T10Q8NGZ9 312 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 OR4K15Q8NH41 348 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 OR1L1Q8NH94 360 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 KCNG3Q8TAE7 436 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 UBALD1Q8TB05 177 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 MRPL30Q8TCC3 161 aaKnown RBP3.79□□□□□ -1.8
CLK3-219ENST00000567805 CHPT1Q8WUD6 406 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 NRG4Q8WWG1 115 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 SGCDQ92629 289 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 NEDD4LQ96PU5 975 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 TM2D1Q9BX74 207 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 TMEM59Q9BXS4 323 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 GON7Q9BXV9 100 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 ABCG5Q9H222 651 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 DUSP21Q9H596 190 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 TAF9BQ9HBM6 251 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 ISYNA1Q9NPH2 558 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 OR2S2Q9NQN1 319 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 KCNIP1Q9NZI2 227 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 JPT1Q9UK76 154 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 LRRC42Q9Y546 428 aa3.79□□□□□ -1.8
CLK3-219ENST00000567805 COL7A1Q02388 2944 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 IGHV3-72A0A0B4J1Y9 119 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 SERPINE3A8MV23 424 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 TMEM14DPA8MWL7 114 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 AP4M1O00189 453 aa3.78□□□□□ -1.8
CLK3-219ENST00000567805 SLC17A2O00624 439 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms