RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 MOSP00540 346 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 HBZP02008 142 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 VSIG8P0DPA2 414 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 CD28P10747 220 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 CHATP28329 748 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 AQP4P55087 323 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 GP2P55259 537 aaKnown RBP8.89□□□□□ -0.99
CDH3-206ENST00000567674 QRFPP83859 136 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 MORN2Q502X0 79 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 SIGIRRQ6IA17 410 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 ZNF880Q6PDB4 577 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 DRAM1Q8N682 238 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 OR51D1Q8NGF3 324 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 OR56B4Q8NH76 319 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 NRG4Q8WWG1 115 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 ORAI1Q96D31 301 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 OR5M11Q96RB7 305 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 RNF5Q99942 180 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 CITED2Q99967 270 aaPredicted RBP8.89□□□□□ -0.99
CDH3-206ENST00000567674 TAF9BQ9HBM6 251 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 PIPOXQ9P0Z9 390 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 ABRACLQ9P1F3 81 aa8.89□□□□□ -0.99
CDH3-206ENST00000567674 RYR3Q15413 4870 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 TRAV1-2A0A0B4J238 106 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 PNMA8CA0A1B0GUJ8 204 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 AP4M1O00189 453 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 PDCD5O14737 125 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 RRP9O43818 475 aaKnown RBP8.88□□□□□ -0.99
CDH3-206ENST00000567674 NAPSAO96009 420 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 OR5H8P0DN80 308 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 ARSBP15848 533 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 GABARAPL2P60520 117 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 HES1Q14469 280 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 ARL6IP1Q15041 203 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 HMGN3Q15651 99 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 BEAN1Q3B7T3 259 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 CT45A1Q5HYN5 189 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 LIPKQ5VXJ0 399 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 CD200R1LQ6Q8B3 271 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 Q6ZS46 218 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 ZNF367Q7RTV3 350 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 CT45A3Q8NHU0 189 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 PTX4Q96A99 478 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 R3HDM4Q96D70 268 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 EAF1Q96JC9 268 aaPredicted RBP8.88□□□□□ -0.99
CDH3-206ENST00000567674 MGLLQ99685 303 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 TMED9Q9BVK6 235 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 BANF2Q9H503 90 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 OR2S2Q9NQN1 319 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 STEAP1Q9UHE8 339 aa8.88□□□□□ -0.99
CDH3-206ENST00000567674 TCRBV4S1A1TA0A5B7 111 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 PSMB11A5LHX3 300 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 FAM172BPA6NC97 362 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 TMEM127O75204 238 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 MPIG6BO95866 241 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 IGKV1D-33P01593 117 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 IGKV1-33P01594 117 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 IGF1P05019 195 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 ELANEP08246 267 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 CD24P25063 80 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 GNG10P50151 68 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 P2RY14Q15391 338 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 SRSF7Q16629 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDH3-206ENST00000567674 TEX38Q6PEX7 206 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 TMEM91Q6ZNR0 172 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 MOB3BQ86TA1 216 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 RNF152Q8N8N0 203 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 OR4K15Q8NH41 348 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 MRPL30Q8TCC3 161 aaKnown RBP8.87□□□□□ -0.99
CDH3-206ENST00000567674 CCDC107Q8WV48 283 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 EDARADDQ8WWZ3 215 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 RCC1LQ96I51 464 aaKnown RBP8.87□□□□□ -0.99
CDH3-206ENST00000567674 MCRIP2Q9BUT9 160 aaKnown RBP8.87□□□□□ -0.99
CDH3-206ENST00000567674 TOLLIPQ9H0E2 274 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 Q9H521 79 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 PLSCR3Q9NRY6 295 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 PLEKHJ1Q9NW61 149 aa8.87□□□□□ -0.99
CDH3-206ENST00000567674 RAB29O14966 203 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 JUNBP17275 347 aaPredicted RBP8.86□□□□□ -0.99
CDH3-206ENST00000567674 RCC1P18754 421 aaPredicted RBP8.86□□□□□ -0.99
CDH3-206ENST00000567674 BLVRBP30043 206 aaPredicted RBP8.86□□□□□ -0.99
CDH3-206ENST00000567674 MC5RP33032 325 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 VHLP40337 213 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 SERPINB10P48595 397 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 ZNF134P52741 427 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 LTC4SQ16873 150 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 PNLIPRP3Q17RR3 467 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 NSUN5P1Q3KNT7 163 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 SLC35E3Q7Z769 313 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 SVOPQ8N4V2 548 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 FAM71E2Q8N5Q1 922 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 OR56B1Q8NGI3 324 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 FCGR1BQ92637 280 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 LEAP2Q969E1 77 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 S1PR3Q99500 378 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 RASL11BQ9BPW5 248 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 ABHD14AQ9BUJ0 271 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 PLGRKTQ9HBL7 147 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 NECAP2Q9NVZ3 263 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 ZNF581Q9P0T4 197 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms