RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 OR7C1O76099 320 aaPredicted RBP12.72□□□□□ -0.37
CDH3-205ENST00000566808 TRGV3P03979 118 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 TFAP2AP05549 437 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 SYNJ2BPP57105 145 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 TP53I3Q53FA7 332 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 AKIRIN2Q53H80 203 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 UNQ5815/PRO19632Q6UWF5 114 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 OR10V1Q8NGI7 309 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 SRD5A3Q9H8P0 318 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 ZNF581Q9P0T4 197 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 TAGLN3Q9UI15 199 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
CDH3-205ENST00000566808 SPINT2O43291 252 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 CSN3P07498 182 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 EGR2P11161 476 aaPredicted RBP12.71□□□□□ -0.37
CDH3-205ENST00000566808 EFNB1P98172 346 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 RSU1Q15404 277 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 NHLRC3Q5JS37 347 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 LGALS9CQ6DKI2 356 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 FDX2Q6P4F2 183 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 PPP1R27Q86WC6 154 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 DEFB125Q8N687 156 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 CCDC107Q8WV48 283 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 FRRS1LQ9P0K9 344 aa12.71□□□□□ -0.37
CDH3-205ENST00000566808 C13orf42A0A1B0GVH6 325 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 AIPO00170 330 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 MAGEB3O15480 346 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
CDH3-205ENST00000566808 TRIM25Q14258 630 aaKnown RBP12.7□□□□□ -0.38
CDH3-205ENST00000566808 LPCAT4Q643R3 524 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 ZNF497Q6ZNH5 498 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 ADGRG5Q8IZF4 528 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 ARHGAP24Q8N264 748 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 OR10K1Q8NGX5 313 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 TNFAIP8L1Q8WVP5 186 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
CDH3-205ENST00000566808 FAM192AQ9GZU8 254 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 ST3GAL6Q9Y274 331 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 VPS13DQ5THJ4 4388 aa12.7□□□□□ -0.38
CDH3-205ENST00000566808 GABRPO00591 440 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 RRHO14718 337 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 OR2A4O95047 310 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 FAM107AO95990 144 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
CDH3-205ENST00000566808 CCR9P51686 369 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 NANOS3P60323 173 aaKnown RBP12.69□□□□□ -0.38
CDH3-205ENST00000566808 PLGLAQ15195 96 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 C12orf73Q69YU5 71 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 LINC00596Q86U02 117 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 NEK7Q8TDX7 302 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 IL4I1Q96RQ9 567 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 FAM103A1Q9BTL3 118 aaKnown RBP12.69□□□□□ -0.38
CDH3-205ENST00000566808 ABHD14AQ9BUJ0 271 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 FBXL15Q9H469 300 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 SLC23A1Q9UHI7 598 aa12.69□□□□□ -0.38
CDH3-205ENST00000566808 A0A0G2JLM5 398 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 ANKRD34BA5PLL1 514 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 OR11H12B2RN74 326 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 H3BUA1 57 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 NDUFB8O95169 186 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 HTR3BO95264 441 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 HBZP02008 142 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 MT-ND4P03905 459 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 CD7P09564 240 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 ATP6V1E1P36543 226 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 MS4A2Q01362 244 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 ZNF85Q03923 595 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 TATDN3Q17R31 274 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 C6orf183Q5T699 404 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 TRAT1Q6PIZ9 186 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 SERPINA12Q8IW75 414 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 PRR18Q8N4B5 295 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 STX19Q8N4C7 294 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 LFNGQ8NES3 379 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 OR5D14Q8NGL3 314 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 RDH12Q96NR8 316 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 GPER1Q99527 375 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 ARL8BQ9NVJ2 186 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 GAB2Q9UQC2 676 aa12.68□□□□□ -0.38
CDH3-205ENST00000566808 ZAR1LA6NP61 321 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 HTR1AP08908 422 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 MECP2P51608 486 aaKnown RBP12.67□□□□□ -0.38
CDH3-205ENST00000566808 ALDH3A2P51648 485 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
CDH3-205ENST00000566808 MPV17LQ2QL34 196 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 ZNF833PQ6ZTB9 187 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 ODF3L1Q8IXM7 274 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 PARP16Q8N5Y8 322 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 POC5Q8NA72 575 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 ASB9Q96DX5 294 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 OVOL2Q9BRP0 275 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 IL36GQ9NZH8 169 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 PEMTQ9UBM1 199 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 TRAPPC2LQ9UL33 140 aa12.67□□□□□ -0.38
CDH3-205ENST00000566808 A0A0J9YWU9 116 aa12.66□□□□□ -0.38
CDH3-205ENST00000566808 OR4C45A6NMZ5 311 aa12.66□□□□□ -0.38
CDH3-205ENST00000566808 FCN1O00602 326 aa12.66□□□□□ -0.38
CDH3-205ENST00000566808 GEMIN2O14893 280 aaKnown RBP12.66□□□□□ -0.38
CDH3-205ENST00000566808 MED14OSP0DP75 135 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms