RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 JAGN1Q8N5M9 183 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 OR4K15Q8NH41 348 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 C4orf3Q8WVX3 66 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 TFAP2CQ92754 450 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 MUL1Q969V5 352 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 PGLYRP3Q96LB9 341 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 DUX3Q96PT4 197 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 C8orf4Q9NR00 106 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 MBNL3Q9NUK0 354 aaKnown RBP11.74□□□□□ -0.53
RNF40-209ENST00000566703 LRRC42Q9Y546 428 aa11.74□□□□□ -0.53
RNF40-209ENST00000566703 BAG2O95816 211 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 PSMB8P28062 276 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 RAB25P57735 213 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 LY6G6FQ5SQ64 297 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 LYPD6Q86Y78 171 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 SETD9Q8NE22 299 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 THRSPQ92748 146 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 HSPB9Q9BQS6 159 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 GHRLQ9UBU3 117 aa11.73□□□□□ -0.53
RNF40-209ENST00000566703 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
RNF40-209ENST00000566703 DNAH3Q8TD57 4116 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 MAGEA13PA6NCF6 341 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 MGMTP16455 207 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 RCC1P18754 421 aaPredicted RBP11.72□□□□□ -0.53
RNF40-209ENST00000566703 HTD2P86397 168 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 LSAMPQ13449 338 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 DOC2BQ14184 412 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 AWAT2Q6E213 333 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 OR10V1Q8NGI7 309 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 OR1L1Q8NH94 360 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 MYOZ3Q8TDC0 251 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 UBE2E2Q96LR5 201 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 KCTD7Q96MP8 289 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 SELENOIQ9C0D9 397 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 TAF9BQ9HBM6 251 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 OR2S2Q9NQN1 319 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 ZNF107Q9UII5 783 aaPredicted RBP11.72□□□□□ -0.53
RNF40-209ENST00000566703 JPT1Q9UK76 154 aa11.72□□□□□ -0.53
RNF40-209ENST00000566703 EFCAB10A6NFE3 127 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 SEC14L6B5MCN3 397 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 YPEL1O60688 119 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 PPIFP30405 207 aaKnown RBP11.71□□□□□ -0.53
RNF40-209ENST00000566703 CAPGP40121 348 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 INSL3P51460 131 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 ST3GAL4Q11206 333 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 FHL3Q13643 280 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 NKAIN3Q8N8D7 197 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 GGHQ92820 318 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 Q96M66 194 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 DERL3Q96Q80 235 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 YPEL2Q96QA6 119 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 OR14A2Q96R54 314 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 BANF2Q9H503 90 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 CNOT2Q9NZN8 540 aaKnown RBP11.71□□□□□ -0.53
RNF40-209ENST00000566703 SCOCQ9UIL1 159 aa11.71□□□□□ -0.53
RNF40-209ENST00000566703 A0A1W2PPK0 400 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 PDCD6O75340 191 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 CRTAPO75718 401 aaPredicted RBP11.7□□□□□ -0.54
RNF40-209ENST00000566703 RGS11O94810 467 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 MAS1P04201 325 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 LUMP51884 338 aaPredicted RBP11.7□□□□□ -0.54
RNF40-209ENST00000566703 ADARB1P78563 741 aaKnown RBP11.7□□□□□ -0.54
RNF40-209ENST00000566703 RUNX1Q01196 453 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 MMDQ15546 238 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 DEFB136Q30KP8 78 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 SIGIRRQ6IA17 410 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 TMEM65Q6PI78 240 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 PRR18Q8N4B5 295 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 DHRSXQ8N5I4 330 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 PACRGLQ8N7B6 248 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 ZFP41Q8N8Y5 198 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 ABHD14AQ9BUJ0 271 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 U3KQK5 164 aa11.7□□□□□ -0.54
RNF40-209ENST00000566703 UBE2QL1A1L167 161 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 HLA-DRB1P01911 266 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 OR8U8P0C7N1 319 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 UBBP0CG47 229 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 VSIG8P0DPA2 414 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 MAPK3P27361 379 aaPredicted RBP11.69□□□□□ -0.54
RNF40-209ENST00000566703 ECI1P42126 302 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 KIAA0141Q14154 515 aaPredicted RBP11.69□□□□□ -0.54
RNF40-209ENST00000566703 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 ZNF491Q8N8L2 437 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 MRPL30Q8TCC3 161 aaKnown RBP11.69□□□□□ -0.54
RNF40-209ENST00000566703 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 GALMQ96C23 342 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 NABP2Q9BQ15 211 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 CST11Q9H112 138 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 OR51J1Q9H342 316 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 PLCXD1Q9NUJ7 323 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
RNF40-209ENST00000566703 I3L521 148 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 EBAG9O00559 213 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 IGLV1-40P01703 118 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 CELP19835 753 aa11.68□□□□□ -0.54
RNF40-209ENST00000566703 WNT4P56705 351 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms