RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TAS2R41P59536 307 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 UBE2NP61088 152 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 STX1BP61266 288 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PSME3P61289 254 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 NAA20P61599 178 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PPP1CBP62140 327 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SNRPD2P62316 118 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 ARF6P62330 175 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 HERV-K104P63124 156 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 HPCAP84074 193 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 VLDLRP98155 873 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TGFBR3Q03167 851 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 HSF2Q03933 536 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PRKCDQ05655 676 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 CHRNB3Q05901 458 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZP4Q12836 540 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 MAB21L1Q13394 359 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ENDOGQ14249 297 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 PDK3Q15120 406 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZMYND11Q15326 602 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 NRF1Q16656 503 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RFX4Q33E94 735 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZBED5Q49AG3 693 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LIN52Q52LA3 116 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LRRC23Q53EV4 343 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 MESTQ5EB52 335 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 KLF17Q5JT82 389 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 C6orf52Q5T4I8 152 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 FAM27BQ5VT28 67 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PRAMEF6Q5VXH4 476 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ACSM5Q6NUN0 579 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 C3orf33Q6P1S2 294 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LEG1Q6P5S2 330 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 C11orf88Q6PI97 169 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TTC33Q6PID6 262 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 CLEC2AQ6UVW9 174 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PLEKHG7Q6ZR37 379 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC16A14Q7RTX9 510 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 NET1Q7Z628 596 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 DHDDSQ86SQ9 333 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ANGPTL5Q86XS5 388 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC30A8Q8IWU4 369 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LRRC75A-AS1Q8N1F1 130 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 DYNAPQ8N1N2 210 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RIBC1Q8N443 379 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 KIR3DL3Q8N743 410 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TRIML2Q8N7C3 387 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZDHHC22Q8N966 263 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LRRC75AQ8NAA5 344 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC30A7Q8NEW0 376 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC26A10Q8NG04 563 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR2T33Q8NG76 320 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR4M1Q8NGD0 313 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR10AD1Q8NGE0 317 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR52E2Q8NGJ4 325 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR52I1Q8NGK6 324 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR8D4Q8NGM9 314 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR9Q1Q8NGQ5 310 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR5J2Q8NH18 312 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR2AE1Q8NHA4 323 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR1F12Q8NHA8 337 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PIGXQ8TBF5 258 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SYNPRQ8TBG9 265 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC7A13Q8TCU3 470 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 KLF14Q8TD94 323 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 TMEM239Q8WW34 195 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 GIMAP1Q8WWP7 306 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.83□□□□□ -2.28
SMG1-212ENST00000566328 C11orf40Q8WZ69 217 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TMEM158Q8WZ71 300 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RORBQ92753 470 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 TMEM45BQ96B21 275 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SGK3Q96BR1 496 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RASD2Q96D21 266 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 RAB39BQ96DA2 213 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZMYND19Q96E35 227 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZHX1-C8orf76Q96EF9 292 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SGTBQ96EQ0 304 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC25A44Q96H78 314 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 C7orf34Q96L11 122 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZNF488Q96MN9 340 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZFP3Q96NJ6 502 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ERMAPQ96PL5 475 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 RBP7Q96R05 134 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 ZNF607Q96SK3 696 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 AMELYQ99218 206 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 CCL13Q99616 98 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 PITX2Q99697 317 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SLC6A7Q99884 636 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 APOL4Q9BPW4 351 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 THTPAQ9BU02 230 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 CHID1Q9BWS9 393 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 MRPL13Q9BYD1 178 aaKnown RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 TTTY10Q9BZA0 68 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 LINC00470Q9BZP3 86 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR2H1Q9GZK4 316 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 FGF23Q9GZV9 251 aaPredicted RBP0.83□□□□□ -2.28
SMG1-212ENST00000566328 RAB1BQ9H0U4 201 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 SYT4Q9H2B2 425 aa0.83□□□□□ -2.28
SMG1-212ENST00000566328 OR51V1Q9H2C8 321 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms