RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 GLAP06280 429 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 GP2P55259 537 aaKnown RBP14.4□□□□□ -0.1
USB1-213ENST00000566292 TMEM30BQ3MIR4 351 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 TRAT1Q6PIZ9 186 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 TFAP2CQ92754 450 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 FAM46BQ96A09 425 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 P2RX4Q99571 388 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 UQCC2Q9BRT2 126 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 TAF9BQ9HBM6 251 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 RAB9BQ9NP90 201 aa14.4□□□□□ -0.1
USB1-213ENST00000566292 MBNL3Q9NUK0 354 aaKnown RBP14.4□□□□□ -0.1
USB1-213ENST00000566292 TXNL1O43396 289 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 PDCD6O75340 191 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 MAPK3P27361 379 aaPredicted RBP14.39□□□□□ -0.11
USB1-213ENST00000566292 SLC6A1P30531 599 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 MYCNOSP40205 109 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 F2RL1P55085 397 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 GNMTQ14749 295 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 MORN2Q502X0 79 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 FAM27D1Q5T7N8 215 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 TEX38Q6PEX7 206 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 UNQ9370/PRO34162Q6UXP9 181 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 LCNL1Q6ZST4 164 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 ZNF695Q8IW36 515 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 FAM71E2Q8N5Q1 922 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 MRPL30Q8TCC3 161 aaKnown RBP14.39□□□□□ -0.11
USB1-213ENST00000566292 DUX3Q96PT4 197 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 HSPB9Q9BQS6 159 aa14.39□□□□□ -0.11
USB1-213ENST00000566292 RPLP1P05386 114 aaKnown RBP14.38□□□□□ -0.11
USB1-213ENST00000566292 GPR50Q13585 617 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 PNLIPRP3Q17RR3 467 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 ACSM3Q53FZ2 586 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 C6orf141Q5SZD1 244 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 STEAP3Q658P3 488 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 OR52L2PQ8NGH6 319 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 THRSPQ92748 146 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 RASL11BQ9BPW5 248 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 OR2S2Q9NQN1 319 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 ERGIC3Q9Y282 383 aa14.38□□□□□ -0.11
USB1-213ENST00000566292 DNAH9Q9NYC9 4486 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 LANCL1O43813 399 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 CDK1P06493 297 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 CFHR3Q02985 330 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 GABPB1Q06547 395 aaPredicted RBP14.37□□□□□ -0.11
USB1-213ENST00000566292 LSAMPQ13449 338 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 OR10K2Q6IF99 312 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 LRRTM1Q86UE6 522 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 ODF3L1Q8IXM7 274 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 OR8H1Q8NGG4 311 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 RAX2Q96IS3 184 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 GPR61Q9BZJ8 451 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 GHRLQ9UBU3 117 aa14.37□□□□□ -0.11
USB1-213ENST00000566292 H0YHG0 523 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 VSIG8P0DPA2 414 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 CHATP28329 748 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 PPP1CCP36873 323 aaKnown RBP14.36□□□□□ -0.11
USB1-213ENST00000566292 FOXE3Q13461 319 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 NKAPLQ5M9Q1 402 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 RNLSQ5VYX0 342 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 ZNF554Q86TJ5 538 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 RNF152Q8N8N0 203 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 SULT4A1Q9BR01 284 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 ABHD14AQ9BUJ0 271 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 GON7Q9BXV9 100 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 CST11Q9H112 138 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 KCNK15Q9H427 330 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 DCLRE1BQ9H816 532 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 KCNIP1Q9NZI2 227 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 JPT1Q9UK76 154 aa14.36□□□□□ -0.11
USB1-213ENST00000566292 LSM2Q9Y333 95 aaKnown RBP14.36□□□□□ -0.11
USB1-213ENST00000566292 CCL24O00175 119 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 SOX6P35712 828 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 HTD2P86397 168 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 DEFB136Q30KP8 78 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 DEFB121Q5J5C9 76 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 CXorf66Q5JRM2 361 aaPredicted RBP14.35□□□□□ -0.11
USB1-213ENST00000566292 C1orf100Q5SVJ3 147 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 MS4A15Q8N5U1 240 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 DPF1Q92782 380 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 MCRIP2Q9BUT9 160 aaKnown RBP14.35□□□□□ -0.11
USB1-213ENST00000566292 TMED9Q9BVK6 235 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 MND1Q9BWT6 205 aa14.35□□□□□ -0.11
USB1-213ENST00000566292 MRPL20Q9BYC9 149 aaKnown RBP14.35□□□□□ -0.11
USB1-213ENST00000566292 PTGES3LE9PB15 166 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 RRP9O43818 475 aaKnown RBP14.34□□□□□ -0.11
USB1-213ENST00000566292 YPEL1O60688 119 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 IGHG4P01861 327 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 ELANEP08246 267 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 UBBP0CG47 229 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 SLC2A2P11168 524 aaPredicted RBP14.34□□□□□ -0.11
USB1-213ENST00000566292 RPS27AP62979 156 aaKnown RBP14.34□□□□□ -0.11
USB1-213ENST00000566292 RBM48Q5RL73 367 aaKnown RBP14.34□□□□□ -0.11
USB1-213ENST00000566292 GLT8D1Q68CQ7 371 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 C6orf201Q7Z4U5 140 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 PHYHIPQ92561 330 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 RITA1Q96K30 269 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 NEDD4LQ96PU5 975 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 YPEL2Q96QA6 119 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 NICN1Q9BSH3 213 aa14.34□□□□□ -0.11
USB1-213ENST00000566292 FAAP24Q9BTP7 215 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms