RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ARL6IP5O75915 188 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 DCTN3O75935 186 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 IFNA16P05015 189 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 SOD3P08294 240 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 SNRPAP09012 282 aaKnown RBP1.83□□□□□ -2.12
UBR1-205ENST00000564540 SEC11BP0C7V7 166 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 HIST1H1EP10412 219 aaKnown RBP1.83□□□□□ -2.12
UBR1-205ENST00000564540 CXCL2P19875 107 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 CXCL3P19876 107 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 IMPA1P29218 277 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 TCL1AP56279 114 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 TAS2R43P59537 309 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 CXCR4P61073 352 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 RANP62826 216 aaKnown RBP1.83□□□□□ -2.12
UBR1-205ENST00000564540 CCL7P80098 99 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 MRPS25P82663 173 aaKnown RBP1.83□□□□□ -2.12
UBR1-205ENST00000564540 TSPAN31Q12999 210 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 TMEM241Q24JQ0 296 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 LRRC75BQ2VPJ9 315 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 TMEM176BQ3YBM2 270 aaPredicted RBP1.83□□□□□ -2.12
UBR1-205ENST00000564540 YIF1BQ5BJH7 314 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 CENPWQ5EE01 88 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 NXNL2Q5VZ03 156 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 OLIG3Q7RTU3 272 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 COMMD7Q86VX2 200 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 TRAPPC5Q8IUR0 188 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 OR2M3Q8NG83 312 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 OR5H2Q8NGV7 314 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 OR10D3Q8NH80 312 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 TAMM41Q96BW9 452 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 DGCR14Q96DF8 476 aaKnown RBP1.83□□□□□ -2.12
UBR1-205ENST00000564540 YPEL4Q96NS1 127 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 DERL3Q96Q80 235 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 ANAPC13Q9BS18 74 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 CHCHD7Q9BUK0 85 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 MS4A8Q9BY19 250 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 TSGA10Q9BZW7 698 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 POMPQ9Y244 141 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 ZNF337Q9Y3M9 751 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 SLC22A7Q9Y694 548 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 EVC2Q86UK5 1308 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 A0A1W2PP64 1363 aa1.83□□□□□ -2.12
UBR1-205ENST00000564540 DYSFO75923 2080 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 THADAQ6YHU6 1953 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 C9JQL5 133 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 KCNK1O00180 336 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 KCNK2O95069 426 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 LHBP01229 141 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 ATP5G1P05496 136 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 LINC00614P0C842 121 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 NELFEP18615 380 aaKnown RBP1.82□□□□□ -2.12
UBR1-205ENST00000564540 ELK4P28324 431 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 MIPP30301 263 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 CBX5P45973 191 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 REG1BP48304 166 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 MP68P56378 58 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 RAB2AP61019 212 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 SKP2Q13309 424 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 C1DQ13901 141 aaKnown RBP1.82□□□□□ -2.12
UBR1-205ENST00000564540 PAFAH1B3Q15102 231 aaKnown RBP1.82□□□□□ -2.12
UBR1-205ENST00000564540 PDK2Q15119 407 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 LUZP6Q538Z0 58 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 MESTQ5EB52 335 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 C1orf195Q5TG92 126 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 ELP2Q6IA86 826 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 TNFAIP8L2Q6P589 184 aaPredicted RBP1.82□□□□□ -2.12
UBR1-205ENST00000564540 MORN3Q6PF18 240 aaPredicted RBP1.82□□□□□ -2.12
UBR1-205ENST00000564540 RASSF6Q6ZTQ3 369 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 FA2HQ7L5A8 372 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 VN1R4Q7Z5H5 301 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 ORMDL3Q8N138 153 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 STK40Q8N2I9 435 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 ZDHHC22Q8N966 263 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 TMEM161BQ8NDZ6 487 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 OR2Z1Q8NG97 314 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 ZNRF2Q8NHG8 242 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 C16orf78Q8WTQ4 265 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 CYGBQ8WWM9 190 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 OPTNQ96CV9 577 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 OLFM3Q96PB7 478 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 TIPINQ9BVW5 301 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 ULBP1Q9BZM6 244 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 PARVAQ9NVD7 372 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 UNC13AQ9UPW8 1703 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 ADGRL3Q9HAR2 1447 aa1.82□□□□□ -2.12
UBR1-205ENST00000564540 MIA3Q5JRA6 1907 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 IGHV1-3A0A0C4DH29 117 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 KPNA3O00505 521 aaPredicted RBP1.81□□□□□ -2.12
UBR1-205ENST00000564540 MAS1P04201 325 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 REG1AP05451 166 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 IL3P08700 152 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 SCGB1C2P0DMR2 95 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 CD28P10747 220 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 ZNF708P17019 499 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 CFL1P23528 166 aaKnown RBP1.81□□□□□ -2.12
UBR1-205ENST00000564540 SLC6A1P30531 599 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 IDH3GP51553 393 aaPredicted RBP1.81□□□□□ -2.12
UBR1-205ENST00000564540 RAP1GDS1P52306 607 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 H2BFSP57053 126 aa1.81□□□□□ -2.12
UBR1-205ENST00000564540 VBP1P61758 197 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms