RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PDCD6O75340 191 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 RGS11O94810 467 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 GNAO1P09471 354 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 IGHV3-43DP0DP04 118 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 HTD2P86397 168 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 FOXE3Q13461 319 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 GPR50Q13585 617 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 CT45A1Q5HYN5 189 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 OGFRL1Q5TC84 451 aaPredicted RBP11.82□□□□□ -0.52
SPG7-210ENST00000564409 AHSA2Q719I0 299 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 RNF152Q8N8N0 203 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 OR4K15Q8NH41 348 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 CT45A3Q8NHU0 189 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 PHYHIPQ92561 330 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 P2RX4Q99571 388 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 BANF2Q9H503 90 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 TAF9BQ9HBM6 251 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 OR2S2Q9NQN1 319 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 FKBP14Q9NWM8 211 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 JPT1Q9UK76 154 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 PNMA8CA0A1B0GUJ8 204 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 K7EIL1 84 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 ELANEP08246 267 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 OR5H8P0DN80 308 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 RCC1P18754 421 aaPredicted RBP11.81□□□□□ -0.52
SPG7-210ENST00000564409 SOX6P35712 828 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
SPG7-210ENST00000564409 MORN2Q502X0 79 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 CXorf66Q5JRM2 361 aaPredicted RBP11.81□□□□□ -0.52
SPG7-210ENST00000564409 LAIR2Q6ISS4 152 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 UNQ9370/PRO34162Q6UXP9 181 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 FAM71E2Q8N5Q1 922 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 BPIFB6Q8NFQ5 453 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 UBALD1Q8TB05 177 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 MND1Q9BWT6 205 aa11.81□□□□□ -0.52
SPG7-210ENST00000564409 H0YHG0 523 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 SLC31A2O15432 143 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 ZNF134P52741 427 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 GLT8D1Q68CQ7 371 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 SIGIRRQ6IA17 410 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 C8orf86Q6ZUL3 223 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 PRR18Q8N4B5 295 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 OR8U1Q8NH10 309 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 OR1L1Q8NH94 360 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 TFAP2CQ92754 450 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 GALMQ96C23 342 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 NEDD4LQ96PU5 975 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 LINC00527Q9UJ94 153 aa11.8□□□□□ -0.52
SPG7-210ENST00000564409 UBE2QL1A1L167 161 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 LINC01548A6NM66 108 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 CCL24O00175 119 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 YPEL1O60688 119 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 IGHG4P01861 327 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 IGF1P05019 195 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 CDK1P06493 297 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 VHLP40337 213 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 KRTAP10-11P60412 298 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 LSAMPQ13449 338 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 KIR2DS1Q14954 304 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 ACSM3Q53FZ2 586 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 C1orf100Q5SVJ3 147 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 OR10V1Q8NGI7 309 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 KCNG3Q8TAE7 436 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 YPEL2Q96QA6 119 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 ABHD14AQ9BUJ0 271 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 DCLRE1BQ9H816 532 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 ABRACLQ9P1F3 81 aa11.79□□□□□ -0.52
SPG7-210ENST00000564409 RAMP3O60896 148 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 CD37P11049 281 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 VDAC1P21796 283 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 CHATP28329 748 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 RANBP1P43487 201 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 GABPB1Q06547 395 aaPredicted RBP11.78□□□□□ -0.52
SPG7-210ENST00000564409 C6orf141Q5SZD1 244 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
SPG7-210ENST00000564409 FAM46BQ96A09 425 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 TMEM59Q9BXS4 323 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 GHITMQ9H3K2 345 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 SCN3BQ9NY72 215 aa11.78□□□□□ -0.52
SPG7-210ENST00000564409 ZNF736B4DX44 427 aaPredicted RBP11.77□□□□□ -0.53
SPG7-210ENST00000564409 BPNT1O95861 308 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.53
SPG7-210ENST00000564409 F2RL1P55085 397 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 RPS27AP62979 156 aaKnown RBP11.77□□□□□ -0.53
SPG7-210ENST00000564409 CFHR3Q02985 330 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 SPHARQ15513 63 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 DEFB121Q5J5C9 76 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 FAM53AQ6NSI3 398 aaPredicted RBP11.77□□□□□ -0.53
SPG7-210ENST00000564409 FAM71F2Q6NXP2 309 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 MOB1BQ7L9L4 216 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 RAX2Q96IS3 184 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 RIMS4Q9H426 269 aaPredicted RBP11.77□□□□□ -0.53
SPG7-210ENST00000564409 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.53
SPG7-210ENST00000564409 ZNF107Q9UII5 783 aaPredicted RBP11.77□□□□□ -0.53
SPG7-210ENST00000564409 DNAH3Q8TD57 4116 aa11.76□□□□□ -0.53
SPG7-210ENST00000564409 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
SPG7-210ENST00000564409 VSIG8P0DPA2 414 aa11.76□□□□□ -0.53
SPG7-210ENST00000564409 SRMP19623 302 aa11.76□□□□□ -0.53
SPG7-210ENST00000564409 PSMB8P28062 276 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms