RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SLC2A2P11168 524 aaPredicted RBP12.59□□□□□ -0.39
RNF40-205ENST00000563909 ERP29P30040 261 aaKnown RBP12.59□□□□□ -0.39
RNF40-205ENST00000563909 RPS19P39019 145 aaKnown RBP12.59□□□□□ -0.39
RNF40-205ENST00000563909 OR3A1P47881 315 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 KCNJ3P48549 501 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 TMBIM6P55061 237 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 RPL23AP62750 156 aaKnown RBP12.59□□□□□ -0.39
RNF40-205ENST00000563909 RPS27AP62979 156 aaKnown RBP12.59□□□□□ -0.39
RNF40-205ENST00000563909 UNC119Q13432 240 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 CTF1Q16619 201 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 ABCA11PQ4W5N1 156 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 PAN3Q58A45 887 aaKnown RBP12.59□□□□□ -0.39
RNF40-205ENST00000563909 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 C18orf65Q6ZTR6 163 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 OR4M1Q8NGD0 313 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 RAB2BQ8WUD1 216 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 BCL7BQ9BQE9 202 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 TM2D1Q9BX74 207 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 CHST6Q9GZX3 395 aa12.59□□□□□ -0.39
RNF40-205ENST00000563909 TRAV24A0A0B4J272 114 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 LDLRAD4O15165 306 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 CSN2P05814 226 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 EDDM3BP56851 147 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 RBM39Q14498 530 aaKnown RBP12.58□□□□□ -0.4
RNF40-205ENST00000563909 IDNKQ5T6J7 187 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 OVCH2Q7RTZ1 564 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 SUMF2Q8NBJ7 301 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 PTX4Q96A99 478 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 ISOC1Q96CN7 298 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 DUX3Q96PT4 197 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 DPCDQ9BVM2 203 aaPredicted RBP12.58□□□□□ -0.4
RNF40-205ENST00000563909 BARHL1Q9BZE3 327 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 KCNK15Q9H427 330 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
RNF40-205ENST00000563909 HILPDAQ9Y5L2 63 aa12.58□□□□□ -0.4
RNF40-205ENST00000563909 MCRIP1C9JLW8 97 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 GLAP06280 429 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 RAB6AP20340 208 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 FUT3P21217 361 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 SCAND1P57086 179 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 MEF2CQ06413 473 aaPredicted RBP12.57□□□□□ -0.4
RNF40-205ENST00000563909 EDDM3AQ14507 147 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 ZNF273Q14593 569 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 C9orf66Q5T8R8 295 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 OR13D1Q8NGV5 346 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 CAPSLQ8WWF8 208 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 SLC25A46Q96AG3 418 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 NEDD4LQ96PU5 975 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 LPAR5Q9H1C0 372 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 ABRACLQ9P1F3 81 aa12.57□□□□□ -0.4
RNF40-205ENST00000563909 RCC2Q9P258 522 aaKnown RBP12.57□□□□□ -0.4
RNF40-205ENST00000563909 A0A0B4J203 849 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 hADV38S2A0JD32 116 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 PSMB11A5LHX3 300 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 METTL21EPA6NDL7 271 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 SH2D7A6NKC9 451 aaPredicted RBP12.56□□□□□ -0.4
RNF40-205ENST00000563909 ODF3BA8MYP8 253 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 HSPB6O14558 160 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 PDCD6O75340 191 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 P2RX3P56373 397 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 KRBOX4Q5JUW0 171 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 RAB12Q6IQ22 244 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 ZNF329Q86UD4 541 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 FAM89BQ8N5H3 189 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 KLHL30-AS1Q8NEE0 82 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 OR56B1Q8NGI3 324 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 AKR1E2Q96JD6 320 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 DCSTAMPQ9H295 470 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 ZNF581Q9P0T4 197 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 PEX16Q9Y5Y5 336 aa12.56□□□□□ -0.4
RNF40-205ENST00000563909 C17orf98A8MV24 154 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 LY86O95711 162 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 SNRNP70P08621 437 aaKnown RBP12.55□□□□□ -0.4
RNF40-205ENST00000563909 SNRPBP14678 240 aaKnown RBP12.55□□□□□ -0.4
RNF40-205ENST00000563909 BLVRBP30043 206 aaPredicted RBP12.55□□□□□ -0.4
RNF40-205ENST00000563909 SLC6A1P30531 599 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 RORCP51449 518 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 PAX5Q02548 391 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 AESQ08117 197 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 DYNC1I2Q13409 638 aaKnown RBP12.55□□□□□ -0.4
RNF40-205ENST00000563909 ATXN7L3Q14CW9 347 aaPredicted RBP12.55□□□□□ -0.4
RNF40-205ENST00000563909 ZNF626Q68DY1 528 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 SIGIRRQ6IA17 410 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 C16orf82Q7Z2V1 217 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 NEK7Q8TDX7 302 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 KCTD12Q96CX2 325 aaKnown RBP12.55□□□□□ -0.4
RNF40-205ENST00000563909 NICN1Q9BSH3 213 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 ETV7Q9Y603 341 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
RNF40-205ENST00000563909 CD24P25063 80 aa12.54□□□□□ -0.4
RNF40-205ENST00000563909 VEGFCP49767 419 aa12.54□□□□□ -0.4
RNF40-205ENST00000563909 DLX6P56179 175 aa12.54□□□□□ -0.4
RNF40-205ENST00000563909 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
RNF40-205ENST00000563909 TPRX1Q8N7U7 411 aa12.54□□□□□ -0.4
RNF40-205ENST00000563909 OR11H6Q8NGC7 330 aa12.54□□□□□ -0.4
RNF40-205ENST00000563909 NDNFQ8TB73 568 aa12.54□□□□□ -0.4
RNF40-205ENST00000563909 LGALS14Q8TCE9 139 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms