RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 PROP1O75360 226 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 CRLF1O75462 422 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 HCKP08631 526 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 NBEAP1P0C6P0 100 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 RNF224P0DH78 156 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 CD36P16671 472 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 VDAC1P21796 283 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 PEBP1P30086 187 aaKnown RBP4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 TSPOP30536 169 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 PFN2P35080 140 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 CA5AP35218 305 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 SULT1A1P50225 295 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 SULT1A2P50226 295 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 SMCO1Q147U7 214 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 SLC10A1Q14973 349 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 DEFB110Q30KQ9 67 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 CYB5R2Q6BCY4 276 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 SPSB3Q6PJ21 355 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 COMMD6Q7Z4G1 85 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 ARPINQ7Z6K5 226 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 DPPA2Q7Z7J5 298 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 STPG4Q8N801 248 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 FLVCR1-AS1Q8TAF5 88 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 CT55Q8WUE5 264 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 SECTM1Q8WVN6 248 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 DUX3Q96PT4 197 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 MED18Q9BUE0 208 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 C20orf85Q9H1P6 137 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 PTGES2Q9H7Z7 377 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 MOB1AQ9H8S9 216 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 OR1A1Q9P1Q5 309 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 MOKQ9UQ07 419 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 FIS1Q9Y3D6 152 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 DNAJC15Q9Y5T4 150 aa4.07□□□□□ -1.76
VPS35P1-201ENST00000563400 SCN8AQ9UQD0 1980 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 IGHV4-4A0A075B6R2 117 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 IGKV1-8A0A0C4DH67 115 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 DHRS7CA6NNS2 312 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 BBIP1A8MTZ0 92 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 ZNF878C9JN71 531 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 LINC01619G3V211 115 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 UGT2B11O75310 529 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 RDH16O75452 317 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 HPNP05981 417 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 PRSS1P07477 247 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 SNRPCP09234 159 aaKnown RBP4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 LINC00032P0C843 101 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 CT45A10P0DMU9 189 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 CPMP14384 443 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 GGT2P36268 569 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 GABRA4P48169 554 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 REG1BP48304 166 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 P2RY4P51582 365 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 NDUFV3P56181 108 aaKnown RBP4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 TAS2R41P59536 307 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 RPL38P63173 70 aaKnown RBP4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 C17orf58Q2M2W7 97 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 CNPY1Q3B7I2 92 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 C1orf195Q5TG92 126 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 SLC48A1Q6P1K1 146 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 TMEM205Q6UW68 189 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 RASSF6Q6ZTQ3 369 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 VN1R4Q7Z5H5 301 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 C1QL2Q7Z5L3 287 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 RPS19BP1Q86WX3 136 aaKnown RBP4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 ZNF575Q86XF7 245 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 OR6T1Q8NGN1 323 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 NAT14Q8WUY8 206 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 LRRC29Q8WV35 223 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 ASB17Q8WXJ9 295 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 ASB13Q8WXK3 278 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 CPNE2Q96FN4 548 aaPredicted RBP4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 CGREF1Q99674 301 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 FBXL15Q9H469 300 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 EFCAB1Q9HAE3 211 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 TREM2Q9NZC2 230 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 HHLA2Q9UM44 414 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 BOKQ9UMX3 212 aaPredicted RBP4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 KLF13Q9Y2Y9 288 aaPredicted RBP4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 GPR179Q6PRD1 2367 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 VCANP13611 3396 aa4.06□□□□□ -1.76
VPS35P1-201ENST00000563400 IGHV1-45A0A0A0MS14 117 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 A0A0G2JND7 137 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 C5orf58C9J3I9 102 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 H7C417 338 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 J3QT63 122 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SLC17A2O00624 439 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SERPINB7O75635 380 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 RP2O75695 350 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 RENP00797 406 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR5H8P0DN80 308 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 PAX6P26367 422 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 KIR2DS2P43631 304 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 CDK9P50750 372 aaKnown RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 NCBP2P52298 156 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 DEFB109BQ30KR1 87 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SYT6Q5T7P8 510 aaPredicted RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 IGFL3Q6UXB1 125 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 ZNF620Q6ZNG0 422 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms