RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 EBPLQ9BY08 206 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 METTL9Q9H1A3 318 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 TXNIPQ9H3M7 391 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 INIPQ9NRY2 104 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 KCNIP2Q9NS61 270 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 ARMC1Q9NVT9 282 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 FAM206AQ9NX38 181 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 ERGIC3Q9Y282 383 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 ICOSQ9Y6W8 199 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 NACADO15069 1562 aa1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 POLR3AO14802 1390 aaPredicted RBP1.83□□□□□ -2.12
SHCBP1-202ENST00000563219 IGHV1-45A0A0A0MS14 117 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ZNF729A6NN14 1252 aaPredicted RBP1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 TMEM114B3SHH9 223 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 F5H5P2 479 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ARL6IP5O75915 188 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CRYZL1O95825 349 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 IGKV1D-33P01593 117 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 IGKV1-33P01594 117 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CALB1P05937 261 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CTXN2P0C2S0 81 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ORM2P19652 201 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CDK9P50750 372 aaKnown RBP1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 KLF3P57682 345 aaPredicted RBP1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 GABARAPL2P60520 117 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ACTBP60709 375 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CXCR4P61073 352 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ARF6P62330 175 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ACTG1P63261 375 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 SKP2Q13309 424 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 C1DQ13901 141 aaKnown RBP1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 PDK2Q15119 407 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 TBC1D28Q2M2D7 210 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 HLA-DRB5Q30154 266 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 COQ5Q5HYK3 327 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 FAM162BQ5T6X4 162 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 DRAM2Q6UX65 266 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 TMEM136Q6ZRR5 245 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 MUC15Q8N387 334 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 SLC25A45Q8N413 288 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 TMEM251Q8N6I4 163 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 UBL4BQ8N7F7 174 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ACBD4Q8NC06 268 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 OR8K1Q8NGG5 319 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 OR5L1Q8NGL2 311 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 OR4C13Q8NGP0 309 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 OR1P1Q8NH06 330 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CLDN23Q96B33 292 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 SMIM12Q96EX1 92 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ANKRD36BP1Q96IX9 119 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 TSC22D3Q99576 134 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 C1orf50Q9BV19 199 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 UGT2B28Q9BY64 529 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CHST5Q9GZS9 411 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 PLEKHJ1Q9NW61 149 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 CMTM6Q9NX76 183 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ZNF586Q9NXT0 402 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 GPR179Q6PRD1 2367 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 ZBED9Q6R2W3 1325 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 MTUS2Q5JR59 1369 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 RAB3GAP2Q9H2M9 1393 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 PTPRGP23470 1445 aa1.82□□□□□ -2.12
SHCBP1-202ENST00000563219 YLPM1P49750 1951 aaKnown RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 IGHV3OR16-8A0A075B7F1 116 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 TINCRA0A1B0GVN0 87 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 VPS37CA5D8V6 355 aaPredicted RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 A8MWP4 228 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 MIF4GDA9UHW6 222 aaKnown RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 B4DEV8 164 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 IGLL5B9A064 214 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 F5H768 121 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 M0R036 132 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 AZIN1O14977 448 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 TCF21O43680 179 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 HPGDSO60760 199 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 SOX14O95416 240 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 OCM2P0CE71 109 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 COX5BP10606 129 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 ZNF7P17097 686 aaPredicted RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 PSMA1P25786 263 aaKnown RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 ELK4P28324 431 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 SERPINB1P30740 379 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 GABRA3P34903 492 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 OMPP47874 163 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 RPL14P50914 215 aaKnown RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 FAM3AP98173 230 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 SPA17Q15506 151 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 GUK1Q16774 197 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 WHAMMP3Q1A5X7 153 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 BRMS1LQ5PSV4 323 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 MRPL2Q5T653 305 aaKnown RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 FAM104BQ5XKR9 115 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 C16orf47Q6ZP98 133 aaPredicted RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 NT5DC3Q86UY8 548 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 GID4Q8IVV7 300 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 ZNF561Q8N587 486 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 C2orf73Q8N5S3 287 aaPredicted RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 APCDD1LQ8NCL9 501 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 OR11G2Q8NGC1 345 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms