RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MEX3AA1L020 520 aaKnown RBP12.68□□□□□ -0.38
USB1-208ENST00000563207 C15orf65H3BRN8 121 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 F2RL2O00254 374 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 XRCC3O43542 346 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 APOA1P02647 267 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 GNB3P16520 340 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 CD34P28906 385 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 SRSF7Q16629 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
USB1-208ENST00000563207 PNLIPRP3Q17RR3 467 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 Q3ZCU0 254 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 CDNFQ49AH0 187 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
USB1-208ENST00000563207 KIRREL1Q96J84 757 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 DPAGT1Q9H3H5 408 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 CHMP1AQ9HD42 196 aaPredicted RBP12.68□□□□□ -0.38
USB1-208ENST00000563207 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
USB1-208ENST00000563207 C12orf77C9JDV5 145 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 TSPAN15O95858 294 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 FBP1P09467 338 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 RCC1P18754 421 aaPredicted RBP12.67□□□□□ -0.38
USB1-208ENST00000563207 SSTR5P35346 364 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 ZNF260Q3ZCT1 412 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 HACD4Q5VWC8 232 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 CLEC7AQ9BXN2 247 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 TAF9BQ9HBM6 251 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 VPREB3Q9UKI3 123 aa12.67□□□□□ -0.38
USB1-208ENST00000563207 TBL2Q9Y4P3 447 aaKnown RBP12.67□□□□□ -0.38
USB1-208ENST00000563207 IGHV2-26A0A0B4J1V2 119 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 TRAV39A0A0B4J263 110 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 MMP23AO75900 390 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 DTYMKP23919 212 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 TALDO1P37837 337 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 PRRX1P54821 245 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 LGALS4P56470 323 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 HTD2P86397 168 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 ARFRP1Q13795 201 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 HMGN3Q15651 99 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 LY6EQ16553 131 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 PDLIM3Q53GG5 364 aaPredicted RBP12.66□□□□□ -0.38
USB1-208ENST00000563207 ZNF626Q68DY1 528 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 ABHD12Q8N2K0 398 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 ZNF596Q8TC21 504 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 CREB3L1Q96BA8 519 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 DGCR14Q96DF8 476 aaKnown RBP12.66□□□□□ -0.38
USB1-208ENST00000563207 WNK1Q9H4A3 2382 aa12.66□□□□□ -0.38
USB1-208ENST00000563207 A0A075B6Q4 140 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 TRAV18A0A075B6X5 111 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 ODF3BA8MYP8 253 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 H3BUX3 64 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 TOR1AO14656 332 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 TPPPO94811 219 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 HBZP02008 142 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 MNDAP41218 407 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 RPL15P61313 204 aaKnown RBP12.65□□□□□ -0.38
USB1-208ENST00000563207 MINOS1Q5TGZ0 78 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 DHRS7BQ6IAN0 325 aaPredicted RBP12.65□□□□□ -0.38
USB1-208ENST00000563207 Q6ZS49 121 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 C8orf31Q8N9H6 132 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 BEND2Q8NDZ0 799 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 OR9G1Q8NH87 305 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 GALMQ96C23 342 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 C16orf95Q9H693 158 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 Q9N2K0 584 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 MINOS1-NBL1R4GNA1 71 aa12.65□□□□□ -0.38
USB1-208ENST00000563207 SDCBPO00560 298 aaPredicted RBP12.64□□□□□ -0.39
USB1-208ENST00000563207 DIRAS3O95661 229 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 ARG1P05089 322 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 COX7A1P24310 79 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 NFYBP25208 207 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 GDNFP39905 211 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 KIR2DS4P43632 304 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 LOXL3P58215 753 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 GNG2P59768 71 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 KIR2DS1Q14954 304 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 LY6G6FQ5SQ64 297 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 TMEM69Q5SWH9 247 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 STEAP3Q658P3 488 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 SETD6Q8TBK2 473 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 SSX3Q99909 188 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 HDHD3Q9BSH5 251 aaPredicted RBP12.64□□□□□ -0.39
USB1-208ENST00000563207 GFOD1Q9NXC2 390 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 JPT1Q9UK76 154 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 ADAM30Q9UKF2 790 aa12.64□□□□□ -0.39
USB1-208ENST00000563207 PRKDCP78527 4128 aaKnown RBP12.64□□□□□ -0.39
USB1-208ENST00000563207 NOTCH1P46531 2555 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 TMEM235A6NFC5 223 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 TRDCB7Z8K6 153 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 HPGDSO60760 199 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 TSPAN9O75954 239 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 RGS11O94810 467 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 IGLV1-47P01700 117 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 FCGR3AP08637 254 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 HLA-DRB3P79483 266 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 C1QL4Q86Z23 238 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
USB1-208ENST00000563207 OR1L1Q8NH94 360 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms