RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 RPL15P61313 204 aaKnown RBP5□□□□□ -1.61
CNOT1-204ENST00000563130 MXD1Q05195 221 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 FAM189A2Q15884 450 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 HLA-DRB5Q30154 266 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 MOGAT2Q3SYC2 334 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 ZNF880Q6PDB4 577 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 OR2C3Q8N628 320 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 OR56B1Q8NGI3 324 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 OR9G1Q8NH87 305 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 SPATA3Q8NHX4 192 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 ZNF596Q8TC21 504 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 CCDC107Q8WV48 283 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 ARL11Q969Q4 196 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 ARHGAP5-AS1Q96IT6 56 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 DPAGT1Q9H3H5 408 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 PLEKHJ1Q9NW61 149 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 TRAPPC2LQ9UL33 140 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 PSG11Q9UQ72 335 aa5□□□□□ -1.61
CNOT1-204ENST00000563130 TMEM89A2RUT3 159 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 FAM172BPA6NC97 362 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 LY6LH3BQJ8 138 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 J3QR06 171 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 HKR1P10072 659 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 PAX6P26367 422 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 HTR1DP28221 377 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 RPS19P39019 145 aaKnown RBP4.99□□□□□ -1.61
CNOT1-204ENST00000563130 COMPP49747 757 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-204ENST00000563130 DYNLT3P51808 116 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 TMEM30BQ3MIR4 351 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 Q3ZCU0 254 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 C6orf183Q5T699 404 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 TRAT1Q6PIZ9 186 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 Q6ZTK2 550 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 C8orf31Q8N9H6 132 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 OR10R2Q8NGX6 335 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 OR5R1Q8NH85 324 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 SSX3Q99909 188 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 PECRQ9BY49 303 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 MRPS26Q9BYN8 205 aaKnown RBP4.99□□□□□ -1.61
CNOT1-204ENST00000563130 RIMS4Q9H426 269 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-204ENST00000563130 TAF9BQ9HBM6 251 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 GFOD1Q9NXC2 390 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 DPM3Q9P2X0 92 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 AK3Q9UIJ7 227 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 DAPK2Q9UIK4 370 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 VPREB3Q9UKI3 123 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 BUB1B-PAK6H3BSN5 160 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 MFNGO00587 321 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 GABARAPO95166 117 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 HBZP02008 142 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 NFYBP25208 207 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 DYNC1I2Q13409 638 aaKnown RBP4.99□□□□□ -1.61
CNOT1-204ENST00000563130 HMGN3Q15651 99 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 SSX2Q16385 188 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 CTF1Q16619 201 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 LRRC75BQ2VPJ9 315 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 OLFML2AQ68BL7 652 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 ANKRD13BQ86YJ7 626 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 LINC00311Q8N616 119 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 ZNF439Q8NDP4 499 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 CREB3L1Q96BA8 519 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 MMP28Q9H239 520 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.99□□□□□ -1.61
CNOT1-204ENST00000563130 U3KQE9 123 aa4.99□□□□□ -1.61
CNOT1-204ENST00000563130 METTL21EPA6NDL7 271 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 LEUTXA8MZ59 168 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 H3BUX3 64 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 SPINT2O43291 252 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 PRRX1P54821 245 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 NCS1P62166 190 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 LSM3P62310 102 aaKnown RBP4.98□□□□□ -1.61
CNOT1-204ENST00000563130 HTD2P86397 168 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 LY6G6FQ5SQ64 297 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 STEAP3Q658P3 488 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 FAM53AQ6NSI3 398 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-204ENST00000563130 MOB1BQ7L9L4 216 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 C5orf24Q7Z6I8 188 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 CROCCP3Q8IVE0 287 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 OR5H6Q8NGV6 325 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 OR1L1Q8NH94 360 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 UBALD1Q8TB05 177 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 LGALS14Q8TCE9 139 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 LEAP2Q969E1 77 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 SLC25A38Q96DW6 304 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 RAB3CQ96E17 227 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 HDHD3Q9BSH5 251 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-204ENST00000563130 NAA50Q9GZZ1 169 aaKnown RBP4.98□□□□□ -1.61
CNOT1-204ENST00000563130 RAB9BQ9NP90 201 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 C12orf4Q9NQ89 552 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 ETV7Q9Y603 341 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 SERPINE3A8MV23 424 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 OOSP1A8MZH6 123 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 SDCBPO00560 298 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-204ENST00000563130 TOR1AO14656 332 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 GPR137BO60478 399 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 IGHV3-7P01780 117 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 HIST1H1DP16402 221 aaKnown RBP4.98□□□□□ -1.61
CNOT1-204ENST00000563130 ZNF134P52741 427 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 ZNF137PP52743 207 aa4.98□□□□□ -1.61
CNOT1-204ENST00000563130 LTC4SQ16873 150 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms